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Artigo de periodico
Combination of differential expression and co-expression network analyses identify novel conserved age-associated changes among different tissues (2023)
Batalha, Caio M. P. F; Fujita, André ; Souza-Pinto, Nadja Cristhina de
Source: bioRxiv. Unidades: IME, IQ
Subjects: ENVELHECIMENTO, EXPRESSÃO GÊNICA
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BATALHA, Caio M. P. F e FUJITA, André e SOUZA-PINTO, Nadja Cristhina de. Combination of differential expression and co-expression network analyses identify novel conserved age-associated changes among different tissues. bioRxiv, 2023Tradução . . Disponível em: https://doi.org/10.1101/2023.05.26.542445. Acesso em: 06 nov. 2024.
APA
Batalha, C. M. P. F., Fujita, A., & Souza-Pinto, N. C. de. (2023). Combination of differential expression and co-expression network analyses identify novel conserved age-associated changes among different tissues. bioRxiv. doi:10.1101/2023.05.26.542445
NLM
Batalha CMPF, Fujita A, Souza-Pinto NC de. Combination of differential expression and co-expression network analyses identify novel conserved age-associated changes among different tissues [Internet]. bioRxiv. 2023 ;[citado 2024 nov. 06 ] Available from: https://doi.org/10.1101/2023.05.26.542445
Vancouver
Batalha CMPF, Fujita A, Souza-Pinto NC de. Combination of differential expression and co-expression network analyses identify novel conserved age-associated changes among different tissues [Internet]. bioRxiv. 2023 ;[citado 2024 nov. 06 ] Available from: https://doi.org/10.1101/2023.05.26.542445
Artigo de periodico
Cell-to-cell trafficking patterns in cell lines of Araucaria angustifolia (Brazilian pine) with contrasting embryogenic potential (2022)
Navarro, Bruno V ; Elbl, Paula ; Oliveira, Leandro F. de ; Piovezani, Amanda R ; Santos, André L. W. dos ; Souza, Diego Trindade de ; Demarco, Diego ; Buckeridge, Marcos ; Floh, Eny Iochevet Segal
Source: Plant Cell, Tissue and Organ Culture. Unidades: IB, ESALQ, BIOINFORMÁTICA, IME
Subjects: BOTÂNICA (CLASSIFICAÇÃO), EXPRESSÃO GÊNICA, CONÍFERAS, EMBRIOGÊNESE SOMÁTICA, DESENVOLVIMENTO VEGETAL, GENÉTICA VEGETAL, MORFOGÊNESE VEGETAL
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NAVARRO, Bruno V et al. Cell-to-cell trafficking patterns in cell lines of Araucaria angustifolia (Brazilian pine) with contrasting embryogenic potential. Plant Cell, Tissue and Organ Culture, v. 148, p. 81-93, 2022Tradução . . Disponível em: https://doi.org/10.1007/s11240-021-02166-4. Acesso em: 06 nov. 2024.
APA
Navarro, B. V., Elbl, P., Oliveira, L. F. de, Piovezani, A. R., Santos, A. L. W. dos, Souza, D. T. de, et al. (2022). Cell-to-cell trafficking patterns in cell lines of Araucaria angustifolia (Brazilian pine) with contrasting embryogenic potential. Plant Cell, Tissue and Organ Culture, 148, 81-93. doi:10.1007/s11240-021-02166-4
NLM
Navarro BV, Elbl P, Oliveira LF de, Piovezani AR, Santos ALW dos, Souza DT de, Demarco D, Buckeridge M, Floh EIS. Cell-to-cell trafficking patterns in cell lines of Araucaria angustifolia (Brazilian pine) with contrasting embryogenic potential [Internet]. Plant Cell, Tissue and Organ Culture. 2022 ; 148 81-93.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1007/s11240-021-02166-4
Vancouver
Navarro BV, Elbl P, Oliveira LF de, Piovezani AR, Santos ALW dos, Souza DT de, Demarco D, Buckeridge M, Floh EIS. Cell-to-cell trafficking patterns in cell lines of Araucaria angustifolia (Brazilian pine) with contrasting embryogenic potential [Internet]. Plant Cell, Tissue and Organ Culture. 2022 ; 148 81-93.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1007/s11240-021-02166-4
Artigo de periodico
Bayesian criterion for identification of differentially expressed genes (2021)
Saraiva, Erlandson F ; Milan, Luis Aparecido ; Pereira, Carlos Alberto de Bragança
Source: Communications in Statistics: Case Studies, Data Analysis and Applications. Unidade: IME
Subjects: INFERÊNCIA BAYESIANA, EXPRESSÃO GÊNICA
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SARAIVA, Erlandson F e MILAN, Luis Aparecido e PEREIRA, Carlos Alberto de Bragança. Bayesian criterion for identification of differentially expressed genes. Communications in Statistics: Case Studies, Data Analysis and Applications, v. 7, n. 1, p. 1-14, 2021Tradução . . Disponível em: https://doi.org/10.1080/23737484.2020.1800535. Acesso em: 06 nov. 2024.
APA
Saraiva, E. F., Milan, L. A., & Pereira, C. A. de B. (2021). Bayesian criterion for identification of differentially expressed genes. Communications in Statistics: Case Studies, Data Analysis and Applications, 7( 1), 1-14. doi:10.1080/23737484.2020.1800535
NLM
Saraiva EF, Milan LA, Pereira CA de B. Bayesian criterion for identification of differentially expressed genes [Internet]. Communications in Statistics: Case Studies, Data Analysis and Applications. 2021 ; 7( 1): 1-14.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1080/23737484.2020.1800535
Vancouver
Saraiva EF, Milan LA, Pereira CA de B. Bayesian criterion for identification of differentially expressed genes [Internet]. Communications in Statistics: Case Studies, Data Analysis and Applications. 2021 ; 7( 1): 1-14.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1080/23737484.2020.1800535
Artigo de periodico
Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop (2019)
Souza, Gláucia Mendes ; Van Sluys, Marie-Anne ; Lembke, Carolina Gimiliani ; Lee, Hayan; Margarido, Gabriel Rodrigues Alves ; Hotta, Carlos Takeshi ; Gaiarsa, Jonas Weissmann ; Diniz, Augusto Lima ; Oliveira, Mauro de Medeiros ; Ferreira, Sávio de Siqueira ; Nishiyama Junior, Milton Yutaka ; Caten, Felipe Ten ; Ragagnin, Geovani Tolfo; Andrade, Pablo de Morais ; Souza, Robson Francisco de ; Nicastro, Gianlucca Gonçalves; Pandya, Ravi ; Kim, Changsoo; Guo, Hui; Durham, Alan Mitchell ; Carneiro, Monalisa Sampaio ; Zhang, Jisen; Zhang, Xingtan; Zhang, Qing; Ming, Ray; Schatz, Michael C ; Davidson, Bob; Paterson, Andrew H; Heckerman, David
Source: GigaScience. Unidades: IQ, IB, ESALQ, ICB, IME, BIOINFORMÁTICA, BIOTECNOLOGIA
Subjects: MICROBIOLOGIA, GENOMAS, CANA-DE-AÇÚCAR, DIVERSIDADE GENÉTICA, BIOMASSA, SEQUENCIAMENTO GENÉTICO, SACAROSE, EXPRESSÃO GÊNICA
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SOUZA, Gláucia Mendes et al. Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop. GigaScience, v. 8, n. 12, p. 18 , 2019Tradução . . Disponível em: https://doi.org/10.1093/gigascience/giz129. Acesso em: 06 nov. 2024.
APA
Souza, G. M., Van Sluys, M. -A., Lembke, C. G., Lee, H., Margarido, G. R. A., Hotta, C. T., et al. (2019). Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop. GigaScience, 8( 12), 18 . doi:10.1093/gigascience/giz129
NLM
Souza GM, Van Sluys M-A, Lembke CG, Lee H, Margarido GRA, Hotta CT, Gaiarsa JW, Diniz AL, Oliveira M de M, Ferreira S de S, Nishiyama Junior MY, Caten FT, Ragagnin GT, Andrade P de M, Souza RF de, Nicastro GG, Pandya R, Kim C, Guo H, Durham AM, Carneiro MS, Zhang J, Zhang X, Zhang Q, Ming R, Schatz MC, Davidson B, Paterson AH, Heckerman D. Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop [Internet]. GigaScience. 2019 ; 8( 12): 18 .[citado 2024 nov. 06 ] Available from: https://doi.org/10.1093/gigascience/giz129
Vancouver
Souza GM, Van Sluys M-A, Lembke CG, Lee H, Margarido GRA, Hotta CT, Gaiarsa JW, Diniz AL, Oliveira M de M, Ferreira S de S, Nishiyama Junior MY, Caten FT, Ragagnin GT, Andrade P de M, Souza RF de, Nicastro GG, Pandya R, Kim C, Guo H, Durham AM, Carneiro MS, Zhang J, Zhang X, Zhang Q, Ming R, Schatz MC, Davidson B, Paterson AH, Heckerman D. Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop [Internet]. GigaScience. 2019 ; 8( 12): 18 .[citado 2024 nov. 06 ] Available from: https://doi.org/10.1093/gigascience/giz129
Artigo de periodico
Dynamic gene network analysis of caco-2 cell response to shiga toxin-producing Escherichia coli-associated hemolytic-uremic syndrome (2019)
Bando, Sílvia Yumi ; Iamashita, Priscila ; Silva, Filipi Nascimento ; Costa, Luciano da Fontoura ; Abe, Cecília M. ; Bertonha, Fernanda Bernardi ; Guth, Beatriz E. C. ; Fujita, André ; Moreira-Filho, Carlos Alberto
Source: Microorganisms. Unidades: FM, IFSC, IME
Subjects: ESCHERICHIA COLI, EXPRESSÃO GÊNICA
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BANDO, Sílvia Yumi et al. Dynamic gene network analysis of caco-2 cell response to shiga toxin-producing Escherichia coli-associated hemolytic-uremic syndrome. Microorganisms, v. 7, n. 7, p. 195-1-195-23, 2019Tradução . . Disponível em: https://doi.org/10.3390/microorganisms7070195. Acesso em: 06 nov. 2024.
APA
Bando, S. Y., Iamashita, P., Silva, F. N., Costa, L. da F., Abe, C. M., Bertonha, F. B., et al. (2019). Dynamic gene network analysis of caco-2 cell response to shiga toxin-producing Escherichia coli-associated hemolytic-uremic syndrome. Microorganisms, 7( 7), 195-1-195-23. doi:10.3390/microorganisms7070195
NLM
Bando SY, Iamashita P, Silva FN, Costa L da F, Abe CM, Bertonha FB, Guth BEC, Fujita A, Moreira-Filho CA. Dynamic gene network analysis of caco-2 cell response to shiga toxin-producing Escherichia coli-associated hemolytic-uremic syndrome [Internet]. Microorganisms. 2019 ; 7( 7): 195-1-195-23.[citado 2024 nov. 06 ] Available from: https://doi.org/10.3390/microorganisms7070195
Vancouver
Bando SY, Iamashita P, Silva FN, Costa L da F, Abe CM, Bertonha FB, Guth BEC, Fujita A, Moreira-Filho CA. Dynamic gene network analysis of caco-2 cell response to shiga toxin-producing Escherichia coli-associated hemolytic-uremic syndrome [Internet]. Microorganisms. 2019 ; 7( 7): 195-1-195-23.[citado 2024 nov. 06 ] Available from: https://doi.org/10.3390/microorganisms7070195
Artigo de periodico
Pericytes Extend Survival of ALS SOD1 Mice and Induce the Expression of Antioxidant Enzymes in the Murine Model and in IPSCs Derived Neuronal Cells from an ALS Patient (2017)
Coatti, Giuliana Castello; Frangini, Miriam; Valadares, Marcos C; Gomes, Juliana Plat; Lima, Natalia O; Cavaçana, Natale; Assoni, Amanda F; Pelatti, Mayra V; Birbrair, Alexander; Lima, Antonio Carlos Pedroso de ; Singer, Julio M; Rocha, Francisco Marcelo M; Da Silva, Giovani Loiola; Mantovani, Mario Sergio; Macedo-Souza, Lúcia Inês; Ferrari, Merari de Fátima Ramires ; Zatz, Mayana
Source: Stem Cell Reviews and Reports. Unidades: IME, IB
Subjects: ESCLEROSE AMIOTRÓFICA LATERAL, DOENÇAS NEURODEGENERATIVAS, DOENÇAS NEUROMUSCULARES, CÉLULAS-TRONCO, NEURÔNIOS MOTORES, EXPRESSÃO GÊNICA, MODELOS ANIMAIS DE DOENÇAS, ESTATÍSTICA APLICADA
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COATTI, Giuliana Castello et al. Pericytes Extend Survival of ALS SOD1 Mice and Induce the Expression of Antioxidant Enzymes in the Murine Model and in IPSCs Derived Neuronal Cells from an ALS Patient. Stem Cell Reviews and Reports, v. 13, n. 5, p. 686–698, 2017Tradução . . Disponível em: https://doi.org/10.1007/s12015-017-9752-2. Acesso em: 06 nov. 2024.
APA
Coatti, G. C., Frangini, M., Valadares, M. C., Gomes, J. P., Lima, N. O., Cavaçana, N., et al. (2017). Pericytes Extend Survival of ALS SOD1 Mice and Induce the Expression of Antioxidant Enzymes in the Murine Model and in IPSCs Derived Neuronal Cells from an ALS Patient. Stem Cell Reviews and Reports, 13( 5), 686–698. doi:10.1007/s12015-017-9752-2
NLM
Coatti GC, Frangini M, Valadares MC, Gomes JP, Lima NO, Cavaçana N, Assoni AF, Pelatti MV, Birbrair A, Lima ACP de, Singer JM, Rocha FMM, Da Silva GL, Mantovani MS, Macedo-Souza LI, Ferrari M de FR, Zatz M. Pericytes Extend Survival of ALS SOD1 Mice and Induce the Expression of Antioxidant Enzymes in the Murine Model and in IPSCs Derived Neuronal Cells from an ALS Patient [Internet]. Stem Cell Reviews and Reports. 2017 ; 13( 5): 686–698.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1007/s12015-017-9752-2
Vancouver
Coatti GC, Frangini M, Valadares MC, Gomes JP, Lima NO, Cavaçana N, Assoni AF, Pelatti MV, Birbrair A, Lima ACP de, Singer JM, Rocha FMM, Da Silva GL, Mantovani MS, Macedo-Souza LI, Ferrari M de FR, Zatz M. Pericytes Extend Survival of ALS SOD1 Mice and Induce the Expression of Antioxidant Enzymes in the Murine Model and in IPSCs Derived Neuronal Cells from an ALS Patient [Internet]. Stem Cell Reviews and Reports. 2017 ; 13( 5): 686–698.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1007/s12015-017-9752-2
Trabalho de evento-resumo periodico
Transcriptome study in striatum of obsessive compulsive disorders (Postmortem study) (2017)
Lisboa, Bianca; Oliveira, Katia de; Lima, Luzia Carreira; Puga, Renato; Ribeiro, Gustavo; Tahira, Ana; Farfel, Jose Marcelo; Jacob-filho, Wilson; Miguel, Euripedes Constantino; Brentani, Helena Paula; Pereira, Carlos Alberto de Bragança
Source: European neuropsychopharmacology. Conference titles: Annual World Congress of Psychiatric Genetics (WCPG). Unidades: FM, IME
Subjects: TRANSTORNO OBSESSIVO-COMPULSIVO, EXPRESSÃO GÊNICA, PSIQUIATRIA
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LISBOA, Bianca et al. Transcriptome study in striatum of obsessive compulsive disorders (Postmortem study). European neuropsychopharmacology. Amsterdam: Faculdade de Medicina, Universidade de São Paulo. . Acesso em: 06 nov. 2024. , 2017
APA
Lisboa, B., Oliveira, K. de, Lima, L. C., Puga, R., Ribeiro, G., Tahira, A., et al. (2017). Transcriptome study in striatum of obsessive compulsive disorders (Postmortem study). European neuropsychopharmacology. Amsterdam: Faculdade de Medicina, Universidade de São Paulo.
NLM
Lisboa B, Oliveira K de, Lima LC, Puga R, Ribeiro G, Tahira A, Farfel JM, Jacob-filho W, Miguel EC, Brentani HP, Pereira CA de B. Transcriptome study in striatum of obsessive compulsive disorders (Postmortem study). European neuropsychopharmacology. 2017 ; 27 S240-S241.[citado 2024 nov. 06 ]
Vancouver
Lisboa B, Oliveira K de, Lima LC, Puga R, Ribeiro G, Tahira A, Farfel JM, Jacob-filho W, Miguel EC, Brentani HP, Pereira CA de B. Transcriptome study in striatum of obsessive compulsive disorders (Postmortem study). European neuropsychopharmacology. 2017 ; 27 S240-S241.[citado 2024 nov. 06 ]
Artigo de periodico
A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer (2016)
Bastos, E. P.; Brentani, H.; Pereira, Carlos Alberto de Bragança ; Polpo, A.; Lima, L.; Puga, R. D.; Pasini, F. S.; Osorio, C. A. B. T.; Roela, R. A.; Achatz, M. I.; Trapé, A. P.; Gonzalez-Angulo, A. M.; Brentani, M. M.
Source: PloS One. Unidades: FM, IME
Subjects: PROGNÓSTICO, EXPRESSÃO GÊNICA, CÉLULAS ESTROMAIS, NEOPLASIAS MAMÁRIAS
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BASTOS, E. P. et al. A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer. PloS One, v. 11, n. 4, p. 21 , 2016Tradução . . Disponível em: https://doi.org/10.1371/journal.pone.0154325. Acesso em: 06 nov. 2024.
APA
Bastos, E. P., Brentani, H., Pereira, C. A. de B., Polpo, A., Lima, L., Puga, R. D., et al. (2016). A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer. PloS One, 11( 4), 21 . doi:10.1371/journal.pone.0154325
NLM
Bastos EP, Brentani H, Pereira CA de B, Polpo A, Lima L, Puga RD, Pasini FS, Osorio CABT, Roela RA, Achatz MI, Trapé AP, Gonzalez-Angulo AM, Brentani MM. A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer [Internet]. PloS One. 2016 ; 11( 4): 21 .[citado 2024 nov. 06 ] Available from: https://doi.org/10.1371/journal.pone.0154325
Vancouver
Bastos EP, Brentani H, Pereira CA de B, Polpo A, Lima L, Puga RD, Pasini FS, Osorio CABT, Roela RA, Achatz MI, Trapé AP, Gonzalez-Angulo AM, Brentani MM. A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer [Internet]. PloS One. 2016 ; 11( 4): 21 .[citado 2024 nov. 06 ] Available from: https://doi.org/10.1371/journal.pone.0154325
Artigo de periodico
Protein synthesis driven by dynamical stochastic transcription (2016)
Innocentini, Guilherme da Costa Pereira ; Forger, Frank Michael ; Radulescu, Ovidiu ; Antoneli, Fernando
Source: Bulletin of Mathematical Biology. Unidade: IME
Subjects: EXPRESSÃO GÊNICA, BIOMATEMÁTICA
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INNOCENTINI, Guilherme da Costa Pereira et al. Protein synthesis driven by dynamical stochastic transcription. Bulletin of Mathematical Biology, v. 78, n. Ja 2016, p. 110-131, 2016Tradução . . Disponível em: https://doi.org/10.1007/s11538-015-0131-3. Acesso em: 06 nov. 2024.
APA
Innocentini, G. da C. P., Forger, F. M., Radulescu, O., & Antoneli, F. (2016). Protein synthesis driven by dynamical stochastic transcription. Bulletin of Mathematical Biology, 78( Ja 2016), 110-131. doi:10.1007/s11538-015-0131-3
NLM
Innocentini G da CP, Forger FM, Radulescu O, Antoneli F. Protein synthesis driven by dynamical stochastic transcription [Internet]. Bulletin of Mathematical Biology. 2016 ; 78( Ja 2016): 110-131.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1007/s11538-015-0131-3
Vancouver
Innocentini G da CP, Forger FM, Radulescu O, Antoneli F. Protein synthesis driven by dynamical stochastic transcription [Internet]. Bulletin of Mathematical Biology. 2016 ; 78( Ja 2016): 110-131.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1007/s11538-015-0131-3
Artigo de periodico
Differentially correlated genes in co-expression networks control phenotype transitions (2016)
Thomas, Lina Dornelas; Vyshenska, Dariia; Shulzhenko, Natalia; Iambartsev, Anatoli; Morgun, Andrey
Source: F1000Research. Unidade: IME
Assunto: EXPRESSÃO GÊNICA
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THOMAS, Lina Dornelas et al. Differentially correlated genes in co-expression networks control phenotype transitions. F1000Research, v. 5, p. 2740, 2016Tradução . . Disponível em: https://doi.org/10.12688%2Ff1000research.9708.1. Acesso em: 06 nov. 2024.
APA
Thomas, L. D., Vyshenska, D., Shulzhenko, N., Iambartsev, A., & Morgun, A. (2016). Differentially correlated genes in co-expression networks control phenotype transitions. F1000Research, 5, 2740. doi:10.12688%2Ff1000research.9708.1
NLM
Thomas LD, Vyshenska D, Shulzhenko N, Iambartsev A, Morgun A. Differentially correlated genes in co-expression networks control phenotype transitions [Internet]. F1000Research. 2016 ; 5 2740.[citado 2024 nov. 06 ] Available from: https://doi.org/10.12688%2Ff1000research.9708.1
Vancouver
Thomas LD, Vyshenska D, Shulzhenko N, Iambartsev A, Morgun A. Differentially correlated genes in co-expression networks control phenotype transitions [Internet]. F1000Research. 2016 ; 5 2740.[citado 2024 nov. 06 ] Available from: https://doi.org/10.12688%2Ff1000research.9708.1
Artigo de periodico
CoGA: an R package to identify differentially co-expressed gene sets by analyzing the graph spectra (2015)
Santos, Suzana de Siqueira ; Galatro, Thais Fernanda de Almeida ; Watanabe, Rodrigo Akira; Shinjo, Sueli Mieko Oba ; Marie, Suely Kazue Nagahashi ; Fujita, André
Source: PloS ONE. Unidades: FM, IME
Subjects: EXPRESSÃO GÊNICA, TEORIA DA INFORMAÇÃO, REGULAÇÃO GÊNICA
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SANTOS, Suzana de Siqueira et al. CoGA: an R package to identify differentially co-expressed gene sets by analyzing the graph spectra. PloS ONE, v. 10, n. 8, p. 1-17, 2015Tradução . . Disponível em: https://doi.org/10.1371/journal.pone.0135831. Acesso em: 06 nov. 2024.
APA
Santos, S. de S., Galatro, T. F. de A., Watanabe, R. A., Shinjo, S. M. O., Marie, S. K. N., & Fujita, A. (2015). CoGA: an R package to identify differentially co-expressed gene sets by analyzing the graph spectra. PloS ONE, 10( 8), 1-17. doi:10.1371/journal.pone.0135831
NLM
Santos S de S, Galatro TF de A, Watanabe RA, Shinjo SMO, Marie SKN, Fujita A. CoGA: an R package to identify differentially co-expressed gene sets by analyzing the graph spectra [Internet]. PloS ONE. 2015 ; 10( 8): 1-17.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1371/journal.pone.0135831
Vancouver
Santos S de S, Galatro TF de A, Watanabe RA, Shinjo SMO, Marie SKN, Fujita A. CoGA: an R package to identify differentially co-expressed gene sets by analyzing the graph spectra [Internet]. PloS ONE. 2015 ; 10( 8): 1-17.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1371/journal.pone.0135831
Artigo de periodico
Entropic Biological Score: a cell cycle investigation for GRN inference (2014)
Lopes, Fabrício Martins; Ray, Shubhra Sankar; Hashimoto, Ronaldo Fumio ; César Júnior, Roberto Marcondes
Source: Gene. Unidade: IME
Subjects: BIOINFORMÁTICA, EXPRESSÃO GÊNICA, REGULAÇÃO GÊNICA
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LOPES, Fabrício Martins et al. Entropic Biological Score: a cell cycle investigation for GRN inference. Gene, v. 541, n. 2, p. 129\2013137, 2014Tradução . . Disponível em: https://doi.org/10.1016/j.gene.2014.03.010. Acesso em: 06 nov. 2024.
APA
Lopes, F. M., Ray, S. S., Hashimoto, R. F., & César Júnior, R. M. (2014). Entropic Biological Score: a cell cycle investigation for GRN inference. Gene, 541( 2), 129\2013137. doi:10.1016/j.gene.2014.03.010
NLM
Lopes FM, Ray SS, Hashimoto RF, César Júnior RM. Entropic Biological Score: a cell cycle investigation for GRN inference [Internet]. Gene. 2014 ; 541( 2): 129\2013137.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1016/j.gene.2014.03.010
Vancouver
Lopes FM, Ray SS, Hashimoto RF, César Júnior RM. Entropic Biological Score: a cell cycle investigation for GRN inference [Internet]. Gene. 2014 ; 541( 2): 129\2013137.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1016/j.gene.2014.03.010
Trabalho de evento
Gene networks inference through linear grouping of variables (2014)
Montoya Cubas, Carlos Fernando; Martins Junior, David Correa; Santos, Carlos da Silva dos; Barrera, Júnior
Source: Proceedings. Conference titles: IEEE International Conference on Bioinformatics and Bioengineering - BIBE. Unidade: IME
Subjects: BIOINFORMÁTICA, GENOMAS, EXPRESSÃO GÊNICA
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MONTOYA CUBAS, Carlos Fernando et al. Gene networks inference through linear grouping of variables. 2014, Anais.. Los Alamitos: IEEE, 2014. Disponível em: https://doi.org/10.1109/BIBE.2014.10. Acesso em: 06 nov. 2024.
APA
Montoya Cubas, C. F., Martins Junior, D. C., Santos, C. da S. dos, & Barrera, J. (2014). Gene networks inference through linear grouping of variables. In Proceedings. Los Alamitos: IEEE. doi:10.1109/BIBE.2014.10
NLM
Montoya Cubas CF, Martins Junior DC, Santos C da S dos, Barrera J. Gene networks inference through linear grouping of variables [Internet]. Proceedings. 2014 ;[citado 2024 nov. 06 ] Available from: https://doi.org/10.1109/BIBE.2014.10
Vancouver
Montoya Cubas CF, Martins Junior DC, Santos C da S dos, Barrera J. Gene networks inference through linear grouping of variables [Internet]. Proceedings. 2014 ;[citado 2024 nov. 06 ] Available from: https://doi.org/10.1109/BIBE.2014.10
Artigo de periodico
Growing seed genes from time series data and thresholded Boolean networks with perturbation (2013)
Higa, Carlos H. A; Andrade, Tales Pinheiro de; Hashimoto, Ronaldo Fumio
Source: IEEE-ACM Transactions on Computational Biology and Bioinformatics. Unidade: IME
Subjects: ÁLGEBRAS DE BOOLE, EXPRESSÃO GÊNICA, ANÁLISE DE SÉRIES TEMPORAIS
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
HIGA, Carlos H. A e ANDRADE, Tales Pinheiro de e HASHIMOTO, Ronaldo Fumio. Growing seed genes from time series data and thresholded Boolean networks with perturbation. IEEE-ACM Transactions on Computational Biology and Bioinformatics, v. 10, n. 1, p. 37-49, 2013Tradução . . Disponível em: https://doi.org/10.1109/TCBB.2012.169. Acesso em: 06 nov. 2024.
APA
Higa, C. H. A., Andrade, T. P. de, & Hashimoto, R. F. (2013). Growing seed genes from time series data and thresholded Boolean networks with perturbation. IEEE-ACM Transactions on Computational Biology and Bioinformatics, 10( 1), 37-49. doi:10.1109/TCBB.2012.169
NLM
Higa CHA, Andrade TP de, Hashimoto RF. Growing seed genes from time series data and thresholded Boolean networks with perturbation [Internet]. IEEE-ACM Transactions on Computational Biology and Bioinformatics. 2013 ; 10( 1): 37-49.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1109/TCBB.2012.169
Vancouver
Higa CHA, Andrade TP de, Hashimoto RF. Growing seed genes from time series data and thresholded Boolean networks with perturbation [Internet]. IEEE-ACM Transactions on Computational Biology and Bioinformatics. 2013 ; 10( 1): 37-49.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1109/TCBB.2012.169
Artigo de periodico
A methodology to infer gene networks from spatial patterns of expression: an application to fluorescence in situ hybridization images (2013)
Campiteli, Monica Guimarães; Comin, Cesar Henrique; Costa, Luciano da Fontoura ; Babu, M. Madan; César Júnior, Roberto Marcondes
Source: Molecular BioSystems. Unidades: IFSC, IME
Subjects: REDES COMPLEXAS, EXPRESSÃO GÊNICA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
CAMPITELI, Monica Guimarães et al. A methodology to infer gene networks from spatial patterns of expression: an application to fluorescence in situ hybridization images. Molecular BioSystems, v. 9, n. 7, p. 1926-1930, 2013Tradução . . Disponível em: https://doi.org/10.1039/c3mb25475e. Acesso em: 06 nov. 2024.
APA
Campiteli, M. G., Comin, C. H., Costa, L. da F., Babu, M. M., & César Júnior, R. M. (2013). A methodology to infer gene networks from spatial patterns of expression: an application to fluorescence in situ hybridization images. Molecular BioSystems, 9( 7), 1926-1930. doi:10.1039/c3mb25475e
NLM
Campiteli MG, Comin CH, Costa L da F, Babu MM, César Júnior RM. A methodology to infer gene networks from spatial patterns of expression: an application to fluorescence in situ hybridization images [Internet]. Molecular BioSystems. 2013 ; 9( 7): 1926-1930.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1039/c3mb25475e
Vancouver
Campiteli MG, Comin CH, Costa L da F, Babu MM, César Júnior RM. A methodology to infer gene networks from spatial patterns of expression: an application to fluorescence in situ hybridization images [Internet]. Molecular BioSystems. 2013 ; 9( 7): 1926-1930.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1039/c3mb25475e
Artigo de periodico
Gene expression of peripheral blood lymphocytes may discriminate patients with schizophrenia from controls (2012)
Maschietto, Mariana; Silva, Aderbal; Puga, Renato D; Lima, Leandro; Pereira, Carlos Alberto de Bragança ; Nakano, Eduardo Y; Mello, Barbara; Gama, Clarissa S; Belmonte-de-Abreu, Paulo; Carraro, Dirce M; Palha, Joana A; Brentani, Helena
Source: Psychiatry Research. Unidades: IME, FM
Assunto: EXPRESSÃO GÊNICA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
MASCHIETTO, Mariana et al. Gene expression of peripheral blood lymphocytes may discriminate patients with schizophrenia from controls. Psychiatry Research, 2012Tradução . . Disponível em: https://doi.org/10.1016/j.psychres.2012.04.030. Acesso em: 06 nov. 2024.
APA
Maschietto, M., Silva, A., Puga, R. D., Lima, L., Pereira, C. A. de B., Nakano, E. Y., et al. (2012). Gene expression of peripheral blood lymphocytes may discriminate patients with schizophrenia from controls. Psychiatry Research. doi:10.1016/j.psychres.2012.04.030
NLM
Maschietto M, Silva A, Puga RD, Lima L, Pereira CA de B, Nakano EY, Mello B, Gama CS, Belmonte-de-Abreu P, Carraro DM, Palha JA, Brentani H. Gene expression of peripheral blood lymphocytes may discriminate patients with schizophrenia from controls [Internet]. Psychiatry Research. 2012 ;[citado 2024 nov. 06 ] Available from: https://doi.org/10.1016/j.psychres.2012.04.030
Vancouver
Maschietto M, Silva A, Puga RD, Lima L, Pereira CA de B, Nakano EY, Mello B, Gama CS, Belmonte-de-Abreu P, Carraro DM, Palha JA, Brentani H. Gene expression of peripheral blood lymphocytes may discriminate patients with schizophrenia from controls [Internet]. Psychiatry Research. 2012 ;[citado 2024 nov. 06 ] Available from: https://doi.org/10.1016/j.psychres.2012.04.030
Artigo de periodico
Gene expression complex networks: synthesis, identification, and analysis (2011)
Lopes, Fabrício M.; César Júnior, Roberto Marcondes ; Costa, Luciano da Fontoura
Source: Journal of Computational Biology. Unidades: IME, IFSC
Subjects: BIOINFORMÁTICA, EXPRESSÃO GÊNICA, REDES COMPLEXAS
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
LOPES, Fabrício M. e CÉSAR JÚNIOR, Roberto Marcondes e COSTA, Luciano da Fontoura. Gene expression complex networks: synthesis, identification, and analysis. Journal of Computational Biology, v. 18, n. 10, p. 1353-1367, 2011Tradução . . Disponível em: https://doi.org/10.1089/cmb.2010.0118. Acesso em: 06 nov. 2024.
APA
Lopes, F. M., César Júnior, R. M., & Costa, L. da F. (2011). Gene expression complex networks: synthesis, identification, and analysis. Journal of Computational Biology, 18( 10), 1353-1367. doi:10.1089/cmb.2010.0118
NLM
Lopes FM, César Júnior RM, Costa L da F. Gene expression complex networks: synthesis, identification, and analysis [Internet]. Journal of Computational Biology. 2011 ; 18( 10): 1353-1367.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1089/cmb.2010.0118
Vancouver
Lopes FM, César Júnior RM, Costa L da F. Gene expression complex networks: synthesis, identification, and analysis [Internet]. Journal of Computational Biology. 2011 ; 18( 10): 1353-1367.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1089/cmb.2010.0118
Artigo de periodico
Temporal blastemal cell gene expression analysis in the kidney reveals new Wnt and related signaling pathway genes to be essential for Wilms' tumor onset (2011)
Maschietto, M; Trapé, A. P; Piccoli, F. S; Ricca, T. I; Dias, A. A. M; Coudry, R. A; Galante, P. A; Torres, C; Fahhan, L; Lourenço, S; Grundy, P. E; Camargo, B de; Souza, S de; Neves, Eduardo Jordão; Soares, F A; Brentani, Helena Paula; Carraro, D M
Source: Cell Death and Disease. Unidades: FM, IME
Subjects: EXPRESSÃO GÊNICA, BLASTOCISTO, GENES (ANÁLISE), RIM, NEFROPATIAS, DIFERENCIAÇÃO CELULAR, MARCADOR MOLECULAR, REAÇÃO EM CADEIA POR POLIMERASE
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
MASCHIETTO, M et al. Temporal blastemal cell gene expression analysis in the kidney reveals new Wnt and related signaling pathway genes to be essential for Wilms' tumor onset. Cell Death and Disease, v. 2, p. e224, 2011Tradução . . Disponível em: https://doi.org/10.1038/cddis.2011.105. Acesso em: 06 nov. 2024.
APA
Maschietto, M., Trapé, A. P., Piccoli, F. S., Ricca, T. I., Dias, A. A. M., Coudry, R. A., et al. (2011). Temporal blastemal cell gene expression analysis in the kidney reveals new Wnt and related signaling pathway genes to be essential for Wilms' tumor onset. Cell Death and Disease, 2, e224. doi:10.1038/cddis.2011.105
NLM
Maschietto M, Trapé AP, Piccoli FS, Ricca TI, Dias AAM, Coudry RA, Galante PA, Torres C, Fahhan L, Lourenço S, Grundy PE, Camargo B de, Souza S de, Neves EJ, Soares FA, Brentani HP, Carraro DM. Temporal blastemal cell gene expression analysis in the kidney reveals new Wnt and related signaling pathway genes to be essential for Wilms' tumor onset [Internet]. Cell Death and Disease. 2011 ; 2 e224.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1038/cddis.2011.105
Vancouver
Maschietto M, Trapé AP, Piccoli FS, Ricca TI, Dias AAM, Coudry RA, Galante PA, Torres C, Fahhan L, Lourenço S, Grundy PE, Camargo B de, Souza S de, Neves EJ, Soares FA, Brentani HP, Carraro DM. Temporal blastemal cell gene expression analysis in the kidney reveals new Wnt and related signaling pathway genes to be essential for Wilms' tumor onset [Internet]. Cell Death and Disease. 2011 ; 2 e224.[citado 2024 nov. 06 ] Available from: https://doi.org/10.1038/cddis.2011.105
Parte de monografia/livro
An introduction to time‐varying connectivity estimation for gene regulatory networks (2010)
Fujita, André ; Sato, João Ricardo ; Demasi, Marcos Angelo Almeida ; Miyano, Satoru ; Sogayar, Mari Cleide ; Ferreira, Carlos Eduardo
Source: Medical biostatistics for complex diseases. Unidades: IME, IQ
Subjects: EXPRESSÃO GÊNICA, REGULAÇÃO GÊNICA, INFERÊNCIA BAYESIANA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
FUJITA, André et al. An introduction to time‐varying connectivity estimation for gene regulatory networks. Medical biostatistics for complex diseases. Tradução . Weinheim: Wiley-Blackwell, 2010. . Disponível em: https://doi.org/10.1002/9783527630332.ch11. Acesso em: 06 nov. 2024.
APA
Fujita, A., Sato, J. R., Demasi, M. A. A., Miyano, S., Sogayar, M. C., & Ferreira, C. E. (2010). An introduction to time‐varying connectivity estimation for gene regulatory networks. In Medical biostatistics for complex diseases. Weinheim: Wiley-Blackwell. doi:10.1002/9783527630332.ch11
NLM
Fujita A, Sato JR, Demasi MAA, Miyano S, Sogayar MC, Ferreira CE. An introduction to time‐varying connectivity estimation for gene regulatory networks [Internet]. In: Medical biostatistics for complex diseases. Weinheim: Wiley-Blackwell; 2010. [citado 2024 nov. 06 ] Available from: https://doi.org/10.1002/9783527630332.ch11
Vancouver
Fujita A, Sato JR, Demasi MAA, Miyano S, Sogayar MC, Ferreira CE. An introduction to time‐varying connectivity estimation for gene regulatory networks [Internet]. In: Medical biostatistics for complex diseases. Weinheim: Wiley-Blackwell; 2010. [citado 2024 nov. 06 ] Available from: https://doi.org/10.1002/9783527630332.ch11
Trabalho de evento-resumo
The drosophila development networks (2010)
Campiteli, Monica Guimarães; César Júnior, Roberto Marcondes ; Costa, Luciano da Fontoura
Source: Program. Conference titles: International Workshop on Complex Networks - CompleNet. Unidades: IME, IFSC
Subjects: REDES COMPLEXAS, EXPRESSÃO GÊNICA, DROSOPHILA (ANÁLISE;DESENVOLVIMENTO), FENÓTIPOS
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
CAMPITELI, Monica Guimarães e CÉSAR JÚNIOR, Roberto Marcondes e COSTA, Luciano da Fontoura. The drosophila development networks. 2010, Anais.. Rio de Janeiro: Universidade Federal do Rio de Janeiro - UFRJ, 2010. Disponível em: http://2010.complenet.org/CompleNet/Program_files/FinalProgram.pdf. Acesso em: 06 nov. 2024.
APA
Campiteli, M. G., César Júnior, R. M., & Costa, L. da F. (2010). The drosophila development networks. In Program. Rio de Janeiro: Universidade Federal do Rio de Janeiro - UFRJ. Recuperado de http://2010.complenet.org/CompleNet/Program_files/FinalProgram.pdf
NLM
Campiteli MG, César Júnior RM, Costa L da F. The drosophila development networks [Internet]. Program. 2010 ;[citado 2024 nov. 06 ] Available from: http://2010.complenet.org/CompleNet/Program_files/FinalProgram.pdf
Vancouver
Campiteli MG, César Júnior RM, Costa L da F. The drosophila development networks [Internet]. Program. 2010 ;[citado 2024 nov. 06 ] Available from: http://2010.complenet.org/CompleNet/Program_files/FinalProgram.pdf

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