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  • Artigo de periodico

    Characterizing the regulatory logic of transcriptional control at the DNA sequence level by ensembles of thermodynamic models (2025)

    Sabino, Alan Utsuni ; Guerreiro, Drielly de Moraes ; Kim, Ah-Ram; Ramos, Alexandre Ferreira ; Reinitz, John

    Source: Bioinformatics. Unidades: EACH, FM

    Assunto: DNA

    Acesso à fonteDOIHow to cite
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    • ABNT

      SABINO, Alan Utsuni et al. Characterizing the regulatory logic of transcriptional control at the DNA sequence level by ensembles of thermodynamic models. Bioinformatics, v. 41, n. 10, p. 01-11, 2025Tradução . . Disponível em: http://dx.doi.org/10.1093/bioinformatics/btaf534. Acesso em: 10 nov. 2025.

    • APA

      Sabino, A. U., Guerreiro, D. de M., Kim, A. -R., Ramos, A. F., & Reinitz, J. (2025). Characterizing the regulatory logic of transcriptional control at the DNA sequence level by ensembles of thermodynamic models. Bioinformatics, 41( 10), 01-11. doi:10.1093/bioinformatics/btaf534

    • NLM

      Sabino AU, Guerreiro D de M, Kim A-R, Ramos AF, Reinitz J. Characterizing the regulatory logic of transcriptional control at the DNA sequence level by ensembles of thermodynamic models [Internet]. Bioinformatics. 2025 ; 41( 10): 01-11.[citado 2025 nov. 10 ] Available from: http://dx.doi.org/10.1093/bioinformatics/btaf534

    • Vancouver

      Sabino AU, Guerreiro D de M, Kim A-R, Ramos AF, Reinitz J. Characterizing the regulatory logic of transcriptional control at the DNA sequence level by ensembles of thermodynamic models [Internet]. Bioinformatics. 2025 ; 41( 10): 01-11.[citado 2025 nov. 10 ] Available from: http://dx.doi.org/10.1093/bioinformatics/btaf534

  • Artigo de periodico

    CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes (2020)

    Silva, Vinicius da ; Ramos, Marcel; Groenen, Martien; Crooijmans, Richard; Johansson, Anna; Regitano, Luciana; Coutinho, Luiz Lehmann ; Zimmer, Ralf; Waldron, Levi ; Geistlinger, Ludwig

    Source: Bioinformatics. Unidade: ESALQ

    Subjects: DNA, EXPRESSÃO GÊNICA, FENÓTIPOS, GENÔMICA, MARCADOR MOLECULAR, SEQUENCIAMENTO GENÉTICO, SOFTWARES, VARIAÇÃO GENÉTICA

    Versão PublicadaAcesso à fonteDOIHow to cite
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    • ABNT

      SILVA, Vinicius da et al. CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes. Bioinformatics, v. 36, n. 3, 2020Tradução . . Disponível em: https://doi.org/10.1093/bioinformatics/btz632. Acesso em: 10 nov. 2025.

    • APA

      Silva, V. da, Ramos, M., Groenen, M., Crooijmans, R., Johansson, A., Regitano, L., et al. (2020). CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes. Bioinformatics, 36( 3). doi:10.1093/bioinformatics/btz632

    • NLM

      Silva V da, Ramos M, Groenen M, Crooijmans R, Johansson A, Regitano L, Coutinho LL, Zimmer R, Waldron L, Geistlinger L. CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes [Internet]. Bioinformatics. 2020 ; 36( 3):[citado 2025 nov. 10 ] Available from: https://doi.org/10.1093/bioinformatics/btz632

    • Vancouver

      Silva V da, Ramos M, Groenen M, Crooijmans R, Johansson A, Regitano L, Coutinho LL, Zimmer R, Waldron L, Geistlinger L. CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes [Internet]. Bioinformatics. 2020 ; 36( 3):[citado 2025 nov. 10 ] Available from: https://doi.org/10.1093/bioinformatics/btz632

  • Artigo de periodico

    ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles (2019)

    Silva, Tiago Chedraoui ; Coetzee, Simon G.; Gull, Nicole; Yao, Lijing; Hazelett, Dennis J.; Noushmehr, Houtan ; Lin, De-Chen; Berman, Benjamin P.

    Source: Bioinformatics. Unidade: FMRP

    Subjects: DNA, METILAÇÃO, EXPRESSÃO GÊNICA

    Acesso à fonteDOIHow to cite
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    • ABNT

      SILVA, Tiago Chedraoui et al. ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles. Bioinformatics, v. 35, n. 11, p. 1974-1977, 2019Tradução . . Disponível em: https://doi.org/10.1093/bioinformatics/bty902. Acesso em: 10 nov. 2025.

    • APA

      Silva, T. C., Coetzee, S. G., Gull, N., Yao, L., Hazelett, D. J., Noushmehr, H., et al. (2019). ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles. Bioinformatics, 35( 11), 1974-1977. doi:10.1093/bioinformatics/bty902

    • NLM

      Silva TC, Coetzee SG, Gull N, Yao L, Hazelett DJ, Noushmehr H, Lin D-C, Berman BP. ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles [Internet]. Bioinformatics. 2019 ; 35( 11): 1974-1977.[citado 2025 nov. 10 ] Available from: https://doi.org/10.1093/bioinformatics/bty902

    • Vancouver

      Silva TC, Coetzee SG, Gull N, Yao L, Hazelett DJ, Noushmehr H, Lin D-C, Berman BP. ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles [Internet]. Bioinformatics. 2019 ; 35( 11): 1974-1977.[citado 2025 nov. 10 ] Available from: https://doi.org/10.1093/bioinformatics/bty902
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