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Artigo de periodico
Incremental component tree contour computation (2025)
Silva, Dennis J.; Kosinka, Jiří ; Hashimoto, Ronaldo Fumio ; Roerdink, Jos B. T. M. ; Morimitsu, Alexandre ; Alves, Wonder Alexandre Luz
Fonte: Pattern Recognition Letters. Unidade: IME
Assuntos: PROCESSAMENTO DE IMAGENS, COMPUTAÇÃO GRÁFICA
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ABNT
SILVA, Dennis J. et al. Incremental component tree contour computation. Pattern Recognition Letters, v. 187, p. 115-121, 2025Tradução . . Disponível em: https://doi.org/10.1016/j.patrec.2024.11.019. Acesso em: 28 nov. 2025.
APA
Silva, D. J., Kosinka, J., Hashimoto, R. F., Roerdink, J. B. T. M., Morimitsu, A., & Alves, W. A. L. (2025). Incremental component tree contour computation. Pattern Recognition Letters, 187, 115-121. doi:10.1016/j.patrec.2024.11.019
NLM
Silva DJ, Kosinka J, Hashimoto RF, Roerdink JBTM, Morimitsu A, Alves WAL. Incremental component tree contour computation [Internet]. Pattern Recognition Letters. 2025 ; 187 115-121.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.patrec.2024.11.019
Vancouver
Silva DJ, Kosinka J, Hashimoto RF, Roerdink JBTM, Morimitsu A, Alves WAL. Incremental component tree contour computation [Internet]. Pattern Recognition Letters. 2025 ; 187 115-121.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.patrec.2024.11.019
Artigo de periodico
Gene network analysis of Plasmodium falciparum ubiquitin-proteasomal system pathways reveals co-expression of the E1, E2 and E3 enzymes during intraerythrocytic cycle (2025)
Cano, Lyang Higa ; Ahmed, Waqar ; Lima, Wânia Rezende; Martins, David Corrêa; Parreira, Kleber Simônio ; Garcia, Célia Regina da Silva ; Hashimoto, Ronaldo Fumio
Fonte: Heliyon. Unidades: FCF, IME, Interunidades em Bioinformática, EESC
Assuntos: GENÉTICA, GENÉTICA, BIOINFORMÁTICA
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ABNT
CANO, Lyang Higa et al. Gene network analysis of Plasmodium falciparum ubiquitin-proteasomal system pathways reveals co-expression of the E1, E2 and E3 enzymes during intraerythrocytic cycle. Heliyon, v. 11, n. artigo e44019, p. 1-12, 2025Tradução . . Disponível em: https://doi.org/10.1016/j.heliyon.2025.e44019. Acesso em: 28 nov. 2025.
APA
Cano, L. H., Ahmed, W., Lima, W. R., Martins, D. C., Parreira, K. S., Garcia, C. R. da S., & Hashimoto, R. F. (2025). Gene network analysis of Plasmodium falciparum ubiquitin-proteasomal system pathways reveals co-expression of the E1, E2 and E3 enzymes during intraerythrocytic cycle. Heliyon, 11( artigo e44019), 1-12. doi:10.1016/j.heliyon.2025.e44019
NLM
Cano LH, Ahmed W, Lima WR, Martins DC, Parreira KS, Garcia CR da S, Hashimoto RF. Gene network analysis of Plasmodium falciparum ubiquitin-proteasomal system pathways reveals co-expression of the E1, E2 and E3 enzymes during intraerythrocytic cycle [Internet]. Heliyon. 2025 ; 11( artigo e44019): 1-12.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.heliyon.2025.e44019
Vancouver
Cano LH, Ahmed W, Lima WR, Martins DC, Parreira KS, Garcia CR da S, Hashimoto RF. Gene network analysis of Plasmodium falciparum ubiquitin-proteasomal system pathways reveals co-expression of the E1, E2 and E3 enzymes during intraerythrocytic cycle [Internet]. Heliyon. 2025 ; 11( artigo e44019): 1-12.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.heliyon.2025.e44019
Artigo de periodico
DNA damage-induced ferroptosis: a boolean model regulating p53 and non-coding RNAs in drug resistance (2025)
Gupta, Shantanu ; Silveira, Daner Acunha ; Mombach, Jose Carlos M. ; Hashimoto, Ronaldo Fumio
Fonte: Proteomes. Unidade: IME
Assuntos: BIOINFORMÁTICA, MODELAGEM COMPUTACIONAL, RNA
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GUPTA, Shantanu et al. DNA damage-induced ferroptosis: a boolean model regulating p53 and non-coding RNAs in drug resistance. Proteomes, v. 13, n. 1, p. 1-20, 2025Tradução . . Disponível em: https://doi.org/10.3390/proteomes13010006. Acesso em: 28 nov. 2025.
APA
Gupta, S., Silveira, D. A., Mombach, J. C. M., & Hashimoto, R. F. (2025). DNA damage-induced ferroptosis: a boolean model regulating p53 and non-coding RNAs in drug resistance. Proteomes, 13( 1), 1-20. doi:10.3390/proteomes13010006
NLM
Gupta S, Silveira DA, Mombach JCM, Hashimoto RF. DNA damage-induced ferroptosis: a boolean model regulating p53 and non-coding RNAs in drug resistance [Internet]. Proteomes. 2025 ; 13( 1): 1-20.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/proteomes13010006
Vancouver
Gupta S, Silveira DA, Mombach JCM, Hashimoto RF. DNA damage-induced ferroptosis: a boolean model regulating p53 and non-coding RNAs in drug resistance [Internet]. Proteomes. 2025 ; 13( 1): 1-20.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/proteomes13010006
Artigo de periodico
Multichannel image classification based on adaptive attribute profiles (2025)
Alves, Wonder Alexandre Luz ; Campos, Wander S.; Gobber, Charles F. ; Silva, Dennis J.; Hashimoto, Ronaldo Fumio
Fonte: Pattern Recognition Letters. Unidade: IME
Assunto: SENSORIAMENTO REMOTO
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ABNT
ALVES, Wonder Alexandre Luz et al. Multichannel image classification based on adaptive attribute profiles. Pattern Recognition Letters, v. 187, p. 107-114, 2025Tradução . . Disponível em: https://doi.org/10.1016/j.patrec.2024.11.015. Acesso em: 28 nov. 2025.
APA
Alves, W. A. L., Campos, W. S., Gobber, C. F., Silva, D. J., & Hashimoto, R. F. (2025). Multichannel image classification based on adaptive attribute profiles. Pattern Recognition Letters, 187, 107-114. doi:10.1016/j.patrec.2024.11.015
NLM
Alves WAL, Campos WS, Gobber CF, Silva DJ, Hashimoto RF. Multichannel image classification based on adaptive attribute profiles [Internet]. Pattern Recognition Letters. 2025 ; 187 107-114.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.patrec.2024.11.015
Vancouver
Alves WAL, Campos WS, Gobber CF, Silva DJ, Hashimoto RF. Multichannel image classification based on adaptive attribute profiles [Internet]. Pattern Recognition Letters. 2025 ; 187 107-114.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.patrec.2024.11.015
Artigo de periodico
Targeting NSCLC drug resistance: systems biology insights into the MALAT1/miR-145-5p axis and Wip1 in regulating ferroptosis and apoptosis (2025)
Gupta, Shantanu ; Silveira, Daner Acunha ; Mombach, Jose Carlos M. ; Hashimoto, Ronaldo Fumio
Fonte: Journal of The Royal Society Interface. Unidade: IME
Assuntos: NEOPLASIAS PULMONARES, MEDICAMENTO, SIMULAÇÃO, GEOMETRIA E MODELAGEM COMPUTACIONAL, ESTRATÉGIAS TERAPÊUTICAS
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ABNT
GUPTA, Shantanu et al. Targeting NSCLC drug resistance: systems biology insights into the MALAT1/miR-145-5p axis and Wip1 in regulating ferroptosis and apoptosis. Journal of The Royal Society Interface, v. 22, n. 226, p. 1-11, 2025Tradução . . Disponível em: https://doi.org/10.1098/rsif.2024.0852. Acesso em: 28 nov. 2025.
APA
Gupta, S., Silveira, D. A., Mombach, J. C. M., & Hashimoto, R. F. (2025). Targeting NSCLC drug resistance: systems biology insights into the MALAT1/miR-145-5p axis and Wip1 in regulating ferroptosis and apoptosis. Journal of The Royal Society Interface, 22( 226), 1-11. doi:10.1098/rsif.2024.0852
NLM
Gupta S, Silveira DA, Mombach JCM, Hashimoto RF. Targeting NSCLC drug resistance: systems biology insights into the MALAT1/miR-145-5p axis and Wip1 in regulating ferroptosis and apoptosis [Internet]. Journal of The Royal Society Interface. 2025 ; 22( 226): 1-11.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1098/rsif.2024.0852
Vancouver
Gupta S, Silveira DA, Mombach JCM, Hashimoto RF. Targeting NSCLC drug resistance: systems biology insights into the MALAT1/miR-145-5p axis and Wip1 in regulating ferroptosis and apoptosis [Internet]. Journal of The Royal Society Interface. 2025 ; 22( 226): 1-11.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1098/rsif.2024.0852
Trabalho de evento-anais periodico
Differential maximum euclidean distance transform computation in component trees (2024)
Silva, Dennis José da; Miranda, Paulo André Vechiatto de ; Alves, Wonder Alexandre Luz ; Hashimoto, Ronaldo Fumio ; Kosinka, Jiří ; Roerdink, Jos B. T. M.
Fonte: Discrete Geometry and Mathematical Morphology. DGMM 2024. Lecture Notes in Computer Science vol 14605. Nome do evento: International Conference on Discrete Geometry and Mathematical Morphology - DGMM. Unidade: IME
Assuntos: COMPUTAÇÃO APLICADA, COMPUTAÇÃO GRÁFICA
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ABNT
SILVA, Dennis José da et al. Differential maximum euclidean distance transform computation in component trees. Discrete Geometry and Mathematical Morphology. DGMM 2024. Lecture Notes in Computer Science vol 14605. Cham: Springer. Disponível em: https://doi.org/10.1007/978-3-031-57793-2_6. Acesso em: 28 nov. 2025. , 2024
APA
Silva, D. J. da, Miranda, P. A. V. de, Alves, W. A. L., Hashimoto, R. F., Kosinka, J., & Roerdink, J. B. T. M. (2024). Differential maximum euclidean distance transform computation in component trees. Discrete Geometry and Mathematical Morphology. DGMM 2024. Lecture Notes in Computer Science vol 14605. Cham: Springer. doi:10.1007/978-3-031-57793-2_6
NLM
Silva DJ da, Miranda PAV de, Alves WAL, Hashimoto RF, Kosinka J, Roerdink JBTM. Differential maximum euclidean distance transform computation in component trees [Internet]. Discrete Geometry and Mathematical Morphology. DGMM 2024. Lecture Notes in Computer Science vol 14605. 2024 ;[citado 2025 nov. 28 ] Available from: https://doi.org/10.1007/978-3-031-57793-2_6
Vancouver
Silva DJ da, Miranda PAV de, Alves WAL, Hashimoto RF, Kosinka J, Roerdink JBTM. Differential maximum euclidean distance transform computation in component trees [Internet]. Discrete Geometry and Mathematical Morphology. DGMM 2024. Lecture Notes in Computer Science vol 14605. 2024 ;[citado 2025 nov. 28 ] Available from: https://doi.org/10.1007/978-3-031-57793-2_6
Artigo de periodico
LncRNA PTENP1/miR-21/PTEN axis modulates EMT and drug resistance in cancer: dynamic Boolean modeling for cell Fates in DNA damage response (2024)
Gupta, Shantanu ; Silveira, Daner Acunha ; Lorenzoni, Pedro R. ; Mombach, Jose Carlos M. ; Hashimoto, Ronaldo Fumio
Fonte: International Journal of Molecular Sciences. Unidade: IME
Assuntos: MEDICAMENTO, RNA, GEOMETRIA E MODELAGEM COMPUTACIONAL, NEOPLASIAS, BIOINFORMÁTICA
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ABNT
GUPTA, Shantanu et al. LncRNA PTENP1/miR-21/PTEN axis modulates EMT and drug resistance in cancer: dynamic Boolean modeling for cell Fates in DNA damage response. International Journal of Molecular Sciences, v. 25, n. artigo 8264, p. 1-17, 2024Tradução . . Disponível em: https://doi.org/10.3390/ijms25158264. Acesso em: 28 nov. 2025.
APA
Gupta, S., Silveira, D. A., Lorenzoni, P. R., Mombach, J. C. M., & Hashimoto, R. F. (2024). LncRNA PTENP1/miR-21/PTEN axis modulates EMT and drug resistance in cancer: dynamic Boolean modeling for cell Fates in DNA damage response. International Journal of Molecular Sciences, 25( artigo 8264), 1-17. doi:10.3390/ijms25158264
NLM
Gupta S, Silveira DA, Lorenzoni PR, Mombach JCM, Hashimoto RF. LncRNA PTENP1/miR-21/PTEN axis modulates EMT and drug resistance in cancer: dynamic Boolean modeling for cell Fates in DNA damage response [Internet]. International Journal of Molecular Sciences. 2024 ; 25( artigo 8264): 1-17.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/ijms25158264
Vancouver
Gupta S, Silveira DA, Lorenzoni PR, Mombach JCM, Hashimoto RF. LncRNA PTENP1/miR-21/PTEN axis modulates EMT and drug resistance in cancer: dynamic Boolean modeling for cell Fates in DNA damage response [Internet]. International Journal of Molecular Sciences. 2024 ; 25( artigo 8264): 1-17.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/ijms25158264
Artigo de periodico
A dynamic Boolean network reveals that the BMI1 and MALAT1 axis is associated with drug resistance by limiting miR-145-5p in non-small cell lung cancer (2024)
Gupta, Shantanu ; Silveira, Daner Acunha ; Piedade, Gabriel Pinheiro Strini ; Ostrowski, Miguel P.; Mombach, Jose Carlos M. ; Hashimoto, Ronaldo Fumio
Fonte: Non-coding RNA Research. Unidades: IME, Interunidades em Bioinformática
Assuntos: NEOPLASIAS PULMONARES, ÁLGEBRAS DE BOOLE, APOPTOSE
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ABNT
GUPTA, Shantanu et al. A dynamic Boolean network reveals that the BMI1 and MALAT1 axis is associated with drug resistance by limiting miR-145-5p in non-small cell lung cancer. Non-coding RNA Research, v. 9, n. 1, p. 185-193, 2024Tradução . . Disponível em: https://doi.org/10.1016/j.ncrna.2023.10.008. Acesso em: 28 nov. 2025.
APA
Gupta, S., Silveira, D. A., Piedade, G. P. S., Ostrowski, M. P., Mombach, J. C. M., & Hashimoto, R. F. (2024). A dynamic Boolean network reveals that the BMI1 and MALAT1 axis is associated with drug resistance by limiting miR-145-5p in non-small cell lung cancer. Non-coding RNA Research, 9( 1), 185-193. doi:10.1016/j.ncrna.2023.10.008
NLM
Gupta S, Silveira DA, Piedade GPS, Ostrowski MP, Mombach JCM, Hashimoto RF. A dynamic Boolean network reveals that the BMI1 and MALAT1 axis is associated with drug resistance by limiting miR-145-5p in non-small cell lung cancer [Internet]. Non-coding RNA Research. 2024 ; 9( 1): 185-193.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.ncrna.2023.10.008
Vancouver
Gupta S, Silveira DA, Piedade GPS, Ostrowski MP, Mombach JCM, Hashimoto RF. A dynamic Boolean network reveals that the BMI1 and MALAT1 axis is associated with drug resistance by limiting miR-145-5p in non-small cell lung cancer [Internet]. Non-coding RNA Research. 2024 ; 9( 1): 185-193.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.ncrna.2023.10.008
Artigo de periodico
The genetically encoded calcium indicator GCaMP3 reveals spontaneous calcium oscillations at asexual stages of the human malaria parasite Plasmodium falciparum (2024)
Santos, Benedito Matheus dos ; Pecenin, Mateus Fila; Pereira, Lucas Borges; Springer, Eric; Przyborski, Jude Marek ; Martins Junior, David C; Hashimoto, Ronaldo Fumio ; Garcia, Célia Regina da Silva
Fonte: Molecular and Biochemical Parasitology. Unidades: IME, FCF, FCFRP
Assuntos: PLASMODIUM FALCIPARUM, MALÁRIA, CÁLCIO
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ABNT
SANTOS, Benedito Matheus dos et al. The genetically encoded calcium indicator GCaMP3 reveals spontaneous calcium oscillations at asexual stages of the human malaria parasite Plasmodium falciparum. Molecular and Biochemical Parasitology, v. 260, p. 1-10 art. 111650, 2024Tradução . . Disponível em: https://dx.doi.org/10.1016/j.molbiopara.2024.111650. Acesso em: 28 nov. 2025.
APA
Santos, B. M. dos, Pecenin, M. F., Pereira, L. B., Springer, E., Przyborski, J. M., Martins Junior, D. C., et al. (2024). The genetically encoded calcium indicator GCaMP3 reveals spontaneous calcium oscillations at asexual stages of the human malaria parasite Plasmodium falciparum. Molecular and Biochemical Parasitology, 260, 1-10 art. 111650. doi:10.1016/j.molbiopara.2024.111650
NLM
Santos BM dos, Pecenin MF, Pereira LB, Springer E, Przyborski JM, Martins Junior DC, Hashimoto RF, Garcia CR da S. The genetically encoded calcium indicator GCaMP3 reveals spontaneous calcium oscillations at asexual stages of the human malaria parasite Plasmodium falciparum [Internet]. Molecular and Biochemical Parasitology. 2024 ; 260 1-10 art. 111650.[citado 2025 nov. 28 ] Available from: https://dx.doi.org/10.1016/j.molbiopara.2024.111650
Vancouver
Santos BM dos, Pecenin MF, Pereira LB, Springer E, Przyborski JM, Martins Junior DC, Hashimoto RF, Garcia CR da S. The genetically encoded calcium indicator GCaMP3 reveals spontaneous calcium oscillations at asexual stages of the human malaria parasite Plasmodium falciparum [Internet]. Molecular and Biochemical Parasitology. 2024 ; 260 1-10 art. 111650.[citado 2025 nov. 28 ] Available from: https://dx.doi.org/10.1016/j.molbiopara.2024.111650
Artigo de periodico
A Boolean model of the oncogene role of FAM111B in lung adenocarcinoma (2023)
Gupta, Shantanu ; Silveira, Daner Acunha; Hashimoto, Ronaldo Fumio
Fonte: Computational Biology and Chemistry. Unidade: IME
Assuntos: ÁLGEBRAS DE BOOLE, COMPUTAÇÃO APLICADA, NEOPLASIAS PULMONARES
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ABNT
GUPTA, Shantanu e SILVEIRA, Daner Acunha e HASHIMOTO, Ronaldo Fumio. A Boolean model of the oncogene role of FAM111B in lung adenocarcinoma. Computational Biology and Chemistry, v. 106, p. 1-6, 2023Tradução . . Disponível em: https://doi.org/10.1016/j.compbiolchem.2023.107926. Acesso em: 28 nov. 2025.
APA
Gupta, S., Silveira, D. A., & Hashimoto, R. F. (2023). A Boolean model of the oncogene role of FAM111B in lung adenocarcinoma. Computational Biology and Chemistry, 106, 1-6. doi:10.1016/j.compbiolchem.2023.107926
NLM
Gupta S, Silveira DA, Hashimoto RF. A Boolean model of the oncogene role of FAM111B in lung adenocarcinoma [Internet]. Computational Biology and Chemistry. 2023 ; 106 1-6.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.compbiolchem.2023.107926
Vancouver
Gupta S, Silveira DA, Hashimoto RF. A Boolean model of the oncogene role of FAM111B in lung adenocarcinoma [Internet]. Computational Biology and Chemistry. 2023 ; 106 1-6.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.compbiolchem.2023.107926
Artigo de periodico
Quadra-stable dynamics of p53 and PTEN in the DNA damage response (2023)
Gupta, Shantanu ; Panda, Pritam Kumar ; Silveira, Daner Acunha ; Ahuja, Rajeev ; Hashimoto, Ronaldo Fumio
Fonte: Cells. Unidade: IME
Assuntos: DNA, ANÁLISE DE SÉRIES TEMPORAIS, ÁLGEBRAS DE BOOLE
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ABNT
GUPTA, Shantanu et al. Quadra-stable dynamics of p53 and PTEN in the DNA damage response. Cells, v. 12, n. artigo 1085, p. 1-17, 2023Tradução . . Disponível em: https://doi.org/10.3390/cells12071085. Acesso em: 28 nov. 2025.
APA
Gupta, S., Panda, P. K., Silveira, D. A., Ahuja, R., & Hashimoto, R. F. (2023). Quadra-stable dynamics of p53 and PTEN in the DNA damage response. Cells, 12( artigo 1085), 1-17. doi:10.3390/cells12071085
NLM
Gupta S, Panda PK, Silveira DA, Ahuja R, Hashimoto RF. Quadra-stable dynamics of p53 and PTEN in the DNA damage response [Internet]. Cells. 2023 ; 12( artigo 1085): 1-17.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/cells12071085
Vancouver
Gupta S, Panda PK, Silveira DA, Ahuja R, Hashimoto RF. Quadra-stable dynamics of p53 and PTEN in the DNA damage response [Internet]. Cells. 2023 ; 12( artigo 1085): 1-17.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/cells12071085
Artigo de periodico
The lncRNA DLX6-AS1/miR-16-5p axis regulates autophagy and apoptosis in non-small cell lung cancer: a Boolean model of cell death (2023)
Gupta, Shantanu ; Silveira, Daner Acunha ; Mombach, Jose Carlos M. ; Hashimoto, Ronaldo Fumio
Fonte: Non-coding RNA Research. Unidade: IME
Assuntos: APOPTOSE, ÁLGEBRAS DE BOOLE, COMPUTAÇÃO APLICADA, NEOPLASIAS PULMONARES
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ABNT
GUPTA, Shantanu et al. The lncRNA DLX6-AS1/miR-16-5p axis regulates autophagy and apoptosis in non-small cell lung cancer: a Boolean model of cell death. Non-coding RNA Research, v. 8, n. 4, p. 605-614, 2023Tradução . . Disponível em: https://doi.org/10.1016/j.ncrna.2023.08.003. Acesso em: 28 nov. 2025.
APA
Gupta, S., Silveira, D. A., Mombach, J. C. M., & Hashimoto, R. F. (2023). The lncRNA DLX6-AS1/miR-16-5p axis regulates autophagy and apoptosis in non-small cell lung cancer: a Boolean model of cell death. Non-coding RNA Research, 8( 4), 605-614. doi:10.1016/j.ncrna.2023.08.003
NLM
Gupta S, Silveira DA, Mombach JCM, Hashimoto RF. The lncRNA DLX6-AS1/miR-16-5p axis regulates autophagy and apoptosis in non-small cell lung cancer: a Boolean model of cell death [Internet]. Non-coding RNA Research. 2023 ; 8( 4): 605-614.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.ncrna.2023.08.003
Vancouver
Gupta S, Silveira DA, Mombach JCM, Hashimoto RF. The lncRNA DLX6-AS1/miR-16-5p axis regulates autophagy and apoptosis in non-small cell lung cancer: a Boolean model of cell death [Internet]. Non-coding RNA Research. 2023 ; 8( 4): 605-614.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.ncrna.2023.08.003
Trabalho de evento
Biological sequence analysis using complex networks and entropy maximization: a case study in SARS-CoV-2 (2023)
Pimenta-Zanon, Matheus H. ; de Souza, Vinicius Augusto; Hashimoto, Ronaldo Fumio ; Lopes, Fabricio Martins
Fonte: Ambient intelligence in health care : proceedings. Nome do evento: International Conference on Ambient Intelligence in Health Care - ICAIHC. Unidade: IME
Assuntos: REDES COMPLEXAS, ENTROPIA, COVID-19, ANÁLISE SEQUENCIAL, BIOINFORMÁTICA, RECONHECIMENTO DE PADRÕES
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ABNT
PIMENTA-ZANON, Matheus H. et al. Biological sequence analysis using complex networks and entropy maximization: a case study in SARS-CoV-2. 2023, Anais.. Heidelberg: Springer, 2023. Disponível em: https://doi.org/10.1007/978-981-19-6068-0_44. Acesso em: 28 nov. 2025.
APA
Pimenta-Zanon, M. H., de Souza, V. A., Hashimoto, R. F., & Lopes, F. M. (2023). Biological sequence analysis using complex networks and entropy maximization: a case study in SARS-CoV-2. In Ambient intelligence in health care : proceedings. Heidelberg: Springer. doi:10.1007/978-981-19-6068-0_44
NLM
Pimenta-Zanon MH, de Souza VA, Hashimoto RF, Lopes FM. Biological sequence analysis using complex networks and entropy maximization: a case study in SARS-CoV-2 [Internet]. Ambient intelligence in health care : proceedings. 2023 ;[citado 2025 nov. 28 ] Available from: https://doi.org/10.1007/978-981-19-6068-0_44
Vancouver
Pimenta-Zanon MH, de Souza VA, Hashimoto RF, Lopes FM. Biological sequence analysis using complex networks and entropy maximization: a case study in SARS-CoV-2 [Internet]. Ambient intelligence in health care : proceedings. 2023 ;[citado 2025 nov. 28 ] Available from: https://doi.org/10.1007/978-981-19-6068-0_44
Trabalho de evento
Exploring identifiability in hybrid models of cell signaling pathways (2023)
Sousa, Ronaldo Nogueira de ; Campos, Cristiano G. S ; Wang, Willian ; Hashimoto, Ronaldo Fumio ; Armelin, Hugo Aguirre ; Reis, Marcelo S.
Nome do evento: Brazilian Symposium on Bioinformatics - BSB. Unidades: IME, IQ, Interunidades em Bioinformática
Assuntos: PROBLEMAS INVERSOS, REDES NEURAIS, APRENDIZADO COMPUTACIONAL
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ABNT
SOUSA, Ronaldo Nogueira de et al. Exploring identifiability in hybrid models of cell signaling pathways. 2023, Anais.. Cham: Springer, 2023. Disponível em: https://doi.org/10.1007/978-3-031-42715-2_14. Acesso em: 28 nov. 2025.
APA
Sousa, R. N. de, Campos, C. G. S., Wang, W., Hashimoto, R. F., Armelin, H. A., & Reis, M. S. (2023). Exploring identifiability in hybrid models of cell signaling pathways. In . Cham: Springer. doi:10.1007/978-3-031-42715-2_14
NLM
Sousa RN de, Campos CGS, Wang W, Hashimoto RF, Armelin HA, Reis MS. Exploring identifiability in hybrid models of cell signaling pathways [Internet]. 2023 ;[citado 2025 nov. 28 ] Available from: https://doi.org/10.1007/978-3-031-42715-2_14
Vancouver
Sousa RN de, Campos CGS, Wang W, Hashimoto RF, Armelin HA, Reis MS. Exploring identifiability in hybrid models of cell signaling pathways [Internet]. 2023 ;[citado 2025 nov. 28 ] Available from: https://doi.org/10.1007/978-3-031-42715-2_14
Artigo de periodico
Dynamical analysis of a Boolean network model of the oncogene role of lncRNA ANRIL and lncRNA UFC1 in non-dmall vell lung cancer (2022)
Gupta, Shantanu ; Hashimoto, Ronaldo Fumio
Fonte: Biomolecules. Unidade: IME
Assuntos: FUNÇÕES BOOLEANAS, RNA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
GUPTA, Shantanu e HASHIMOTO, Ronaldo Fumio. Dynamical analysis of a Boolean network model of the oncogene role of lncRNA ANRIL and lncRNA UFC1 in non-dmall vell lung cancer. Biomolecules, v. 12, n. artigo 420, p. 1-19, 2022Tradução . . Disponível em: https://doi.org/10.3390/biom12030420. Acesso em: 28 nov. 2025.
APA
Gupta, S., & Hashimoto, R. F. (2022). Dynamical analysis of a Boolean network model of the oncogene role of lncRNA ANRIL and lncRNA UFC1 in non-dmall vell lung cancer. Biomolecules, 12( artigo 420), 1-19. doi:10.3390/biom12030420
NLM
Gupta S, Hashimoto RF. Dynamical analysis of a Boolean network model of the oncogene role of lncRNA ANRIL and lncRNA UFC1 in non-dmall vell lung cancer [Internet]. Biomolecules. 2022 ; 12( artigo 420): 1-19.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/biom12030420
Vancouver
Gupta S, Hashimoto RF. Dynamical analysis of a Boolean network model of the oncogene role of lncRNA ANRIL and lncRNA UFC1 in non-dmall vell lung cancer [Internet]. Biomolecules. 2022 ; 12( artigo 420): 1-19.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/biom12030420
Artigo de periodico
Dynamical modeling of miR‑34a, miR‑449a, and miR‑16 reveals numerous DDR signaling pathways regulating senescence, autophagy, and apoptosis in HeLa cells (2022)
Gupta, Shantanu ; Panda, Pritam Kumar ; Hashimoto, Ronaldo Fumio ; Samal, Shailesh Kumar ; Mishra, Suman ; Verma, Suresh Kr.; Mishra, Yogendra Kumar ; Ahuja, Rajeev
Fonte: Scientific Reports. Unidade: IME
Assunto: CIÊNCIA DA COMPUTAÇÃO
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
GUPTA, Shantanu et al. Dynamical modeling of miR‑34a, miR‑449a, and miR‑16 reveals numerous DDR signaling pathways regulating senescence, autophagy, and apoptosis in HeLa cells. Scientific Reports, v. 12, n. artigo 4911, p. 1-13, 2022Tradução . . Disponível em: https://doi.org/10.1038/s41598-022-08900-y. Acesso em: 28 nov. 2025.
APA
Gupta, S., Panda, P. K., Hashimoto, R. F., Samal, S. K., Mishra, S., Verma, S. K., et al. (2022). Dynamical modeling of miR‑34a, miR‑449a, and miR‑16 reveals numerous DDR signaling pathways regulating senescence, autophagy, and apoptosis in HeLa cells. Scientific Reports, 12( artigo 4911), 1-13. doi:10.1038/s41598-022-08900-y
NLM
Gupta S, Panda PK, Hashimoto RF, Samal SK, Mishra S, Verma SK, Mishra YK, Ahuja R. Dynamical modeling of miR‑34a, miR‑449a, and miR‑16 reveals numerous DDR signaling pathways regulating senescence, autophagy, and apoptosis in HeLa cells [Internet]. Scientific Reports. 2022 ; 12( artigo 4911): 1-13.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1038/s41598-022-08900-y
Vancouver
Gupta S, Panda PK, Hashimoto RF, Samal SK, Mishra S, Verma SK, Mishra YK, Ahuja R. Dynamical modeling of miR‑34a, miR‑449a, and miR‑16 reveals numerous DDR signaling pathways regulating senescence, autophagy, and apoptosis in HeLa cells [Internet]. Scientific Reports. 2022 ; 12( artigo 4911): 1-13.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1038/s41598-022-08900-y
Artigo de periodico
SARS‑CoV‑2 host prediction based on virus‑host genetic features (2022)
Kawashima, Irina Yuri ; Lopez, Maria Claudia Negret ; Cunha, Marielton dos Passos ; Hashimoto, Ronaldo Fumio
Fonte: Scientific Reports. Unidades: IME, Interunidades em Bioinformática
Assuntos: GEOMETRIA E MODELAGEM COMPUTACIONAL, BIOINFORMÁTICA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
KAWASHIMA, Irina Yuri et al. SARS‑CoV‑2 host prediction based on virus‑host genetic features. Scientific Reports, v. 12, n. artigo 4576, p. 1-9, 2022Tradução . . Disponível em: https://doi.org/10.1038/s41598-022-08350-6. Acesso em: 28 nov. 2025.
APA
Kawashima, I. Y., Lopez, M. C. N., Cunha, M. dos P., & Hashimoto, R. F. (2022). SARS‑CoV‑2 host prediction based on virus‑host genetic features. Scientific Reports, 12( artigo 4576), 1-9. doi:10.1038/s41598-022-08350-6
NLM
Kawashima IY, Lopez MCN, Cunha M dos P, Hashimoto RF. SARS‑CoV‑2 host prediction based on virus‑host genetic features [Internet]. Scientific Reports. 2022 ; 12( artigo 4576): 1-9.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1038/s41598-022-08350-6
Vancouver
Kawashima IY, Lopez MCN, Cunha M dos P, Hashimoto RF. SARS‑CoV‑2 host prediction based on virus‑host genetic features [Internet]. Scientific Reports. 2022 ; 12( artigo 4576): 1-9.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1038/s41598-022-08350-6
Artigo de periodico
A Boolean model of the proliferative role of the lncRNA XIST in non-small cell lung cancer cells (2022)
Gupta, Shantanu ; Silveira, Daner Acunha ; Hashimoto, Ronaldo Fumio ; Mombach, Jose Carlos M.
Fonte: Biology. Unidade: IME
Assuntos: GEOMETRIA E MODELAGEM COMPUTACIONAL, BIOINFORMÁTICA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
GUPTA, Shantanu et al. A Boolean model of the proliferative role of the lncRNA XIST in non-small cell lung cancer cells. Biology, v. 11, n. artigo 480, p. 1-14, 2022Tradução . . Disponível em: https://doi.org/10.3390/biology11040480. Acesso em: 28 nov. 2025.
APA
Gupta, S., Silveira, D. A., Hashimoto, R. F., & Mombach, J. C. M. (2022). A Boolean model of the proliferative role of the lncRNA XIST in non-small cell lung cancer cells. Biology, 11( artigo 480), 1-14. doi:10.3390/biology11040480
NLM
Gupta S, Silveira DA, Hashimoto RF, Mombach JCM. A Boolean model of the proliferative role of the lncRNA XIST in non-small cell lung cancer cells [Internet]. Biology. 2022 ; 11( artigo 480): 1-14.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/biology11040480
Vancouver
Gupta S, Silveira DA, Hashimoto RF, Mombach JCM. A Boolean model of the proliferative role of the lncRNA XIST in non-small cell lung cancer cells [Internet]. Biology. 2022 ; 11( artigo 480): 1-14.[citado 2025 nov. 28 ] Available from: https://doi.org/10.3390/biology11040480
Artigo de periodico
Network analysis reveals that the tumor suppressor lncRNA GAS5 acts as a double-edged sword in response to DNA damage in gastric cancer (2022)
Gupta, Shantanu ; Panda, Pritam Kumar ; Luo, Wei; Hashimoto, Ronaldo Fumio ; Ahuja, Rajeev
Fonte: Scientific Reports. Unidade: IME
Assuntos: FUNÇÕES BOOLEANAS, DNA, RNA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
GUPTA, Shantanu et al. Network analysis reveals that the tumor suppressor lncRNA GAS5 acts as a double-edged sword in response to DNA damage in gastric cancer. Scientific Reports, v. 12, n. artigo 18312, p. 1-10, 2022Tradução . . Disponível em: https://doi.org/10.1038/s41598-022-21492-x. Acesso em: 28 nov. 2025.
APA
Gupta, S., Panda, P. K., Luo, W., Hashimoto, R. F., & Ahuja, R. (2022). Network analysis reveals that the tumor suppressor lncRNA GAS5 acts as a double-edged sword in response to DNA damage in gastric cancer. Scientific Reports, 12( artigo 18312), 1-10. doi:10.1038/s41598-022-21492-x
NLM
Gupta S, Panda PK, Luo W, Hashimoto RF, Ahuja R. Network analysis reveals that the tumor suppressor lncRNA GAS5 acts as a double-edged sword in response to DNA damage in gastric cancer [Internet]. Scientific Reports. 2022 ; 12( artigo 18312): 1-10.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1038/s41598-022-21492-x
Vancouver
Gupta S, Panda PK, Luo W, Hashimoto RF, Ahuja R. Network analysis reveals that the tumor suppressor lncRNA GAS5 acts as a double-edged sword in response to DNA damage in gastric cancer [Internet]. Scientific Reports. 2022 ; 12( artigo 18312): 1-10.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1038/s41598-022-21492-x
Artigo de periodico
An efficient algorithm to update non-flat and incremental attributes in morphological trees (2022)
Gobber, Charles F; Hashimoto, Ronaldo Fumio ; Alves, Wonder Alexandre Luz
Fonte: Pattern Recognition Letters. Unidade: IME
Assunto: PROCESSAMENTO DE IMAGENS
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
GOBBER, Charles F e HASHIMOTO, Ronaldo Fumio e ALVES, Wonder Alexandre Luz. An efficient algorithm to update non-flat and incremental attributes in morphological trees. Pattern Recognition Letters, v. 163, p. 47-54, 2022Tradução . . Disponível em: https://doi.org/10.1016/j.patrec.2022.09.005. Acesso em: 28 nov. 2025.
APA
Gobber, C. F., Hashimoto, R. F., & Alves, W. A. L. (2022). An efficient algorithm to update non-flat and incremental attributes in morphological trees. Pattern Recognition Letters, 163, 47-54. doi:10.1016/j.patrec.2022.09.005
NLM
Gobber CF, Hashimoto RF, Alves WAL. An efficient algorithm to update non-flat and incremental attributes in morphological trees [Internet]. Pattern Recognition Letters. 2022 ; 163 47-54.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.patrec.2022.09.005
Vancouver
Gobber CF, Hashimoto RF, Alves WAL. An efficient algorithm to update non-flat and incremental attributes in morphological trees [Internet]. Pattern Recognition Letters. 2022 ; 163 47-54.[citado 2025 nov. 28 ] Available from: https://doi.org/10.1016/j.patrec.2022.09.005

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