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Artigo de periodico
Plant diversity induces shifts from microbial generalists to specialist by enhancing niche differentiation, microbiome connectivity, and network stability in a temperate grassland (2026)
Finck, Jessica ; Chowdhury, Somak; Griffiths, Robert I ; Malik, Ashish A; Eisenhauer, Nico ; Lange, Markus ; Mendes, Lucas William ; Gleixner, Gerd
Source: Environmental Microbiome. Unidade: CENA
Subjects: ECOLOGIA MICROBIANA, FERTILIDADE DO SOLO, PLANTAS, MICROBIOLOGIA DO SOLO
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ABNT
FINCK, Jessica et al. Plant diversity induces shifts from microbial generalists to specialist by enhancing niche differentiation, microbiome connectivity, and network stability in a temperate grassland. Environmental Microbiome, v. 21, n. 39, p. 1-16, 2026Tradução . . Disponível em: https://doi.org/10.1186/s40793-026-00857-z. Acesso em: 19 abr. 2026.
APA
Finck, J., Chowdhury, S., Griffiths, R. I., Malik, A. A., Eisenhauer, N., Lange, M., et al. (2026). Plant diversity induces shifts from microbial generalists to specialist by enhancing niche differentiation, microbiome connectivity, and network stability in a temperate grassland. Environmental Microbiome, 21( 39), 1-16. doi:10.1186/s40793-026-00857-z
NLM
Finck J, Chowdhury S, Griffiths RI, Malik AA, Eisenhauer N, Lange M, Mendes LW, Gleixner G. Plant diversity induces shifts from microbial generalists to specialist by enhancing niche differentiation, microbiome connectivity, and network stability in a temperate grassland [Internet]. Environmental Microbiome. 2026 ; 21( 39): 1-16.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-026-00857-z
Vancouver
Finck J, Chowdhury S, Griffiths RI, Malik AA, Eisenhauer N, Lange M, Mendes LW, Gleixner G. Plant diversity induces shifts from microbial generalists to specialist by enhancing niche differentiation, microbiome connectivity, and network stability in a temperate grassland [Internet]. Environmental Microbiome. 2026 ; 21( 39): 1-16.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-026-00857-z
Artigo de periodico
Harnessing haloarchaea from halophyte Atriplex nummularia rhizosphere to enhance salt stress tolerance in maize seedlings (2025)
Ventura, João Paulo ; Lacerda-Júnior, Gileno Vieira; Rados, Theopi; Bisson, Alex; Fernandes-Júnior, Paulo Ivan; Melo, Itamar Soares
Source: Environmental Microbiome. Unidade: ESALQ
Subjects: ESTRESSE, MILHO, PLÂNTULAS, RIZOSFERA, SALINIDADE DO SOLO
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ABNT
VENTURA, João Paulo et al. Harnessing haloarchaea from halophyte Atriplex nummularia rhizosphere to enhance salt stress tolerance in maize seedlings. Environmental Microbiome, v. 21, p. 1-20, 2025Tradução . . Disponível em: https://doi.org/10.1186/s40793-025-00698-2. Acesso em: 19 abr. 2026.
APA
Ventura, J. P., Lacerda-Júnior, G. V., Rados, T., Bisson, A., Fernandes-Júnior, P. I., & Melo, I. S. (2025). Harnessing haloarchaea from halophyte Atriplex nummularia rhizosphere to enhance salt stress tolerance in maize seedlings. Environmental Microbiome, 21, 1-20. doi:10.1186/s40793-025-00698-2
NLM
Ventura JP, Lacerda-Júnior GV, Rados T, Bisson A, Fernandes-Júnior PI, Melo IS. Harnessing haloarchaea from halophyte Atriplex nummularia rhizosphere to enhance salt stress tolerance in maize seedlings [Internet]. Environmental Microbiome. 2025 ; 21 1-20.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-025-00698-2
Vancouver
Ventura JP, Lacerda-Júnior GV, Rados T, Bisson A, Fernandes-Júnior PI, Melo IS. Harnessing haloarchaea from halophyte Atriplex nummularia rhizosphere to enhance salt stress tolerance in maize seedlings [Internet]. Environmental Microbiome. 2025 ; 21 1-20.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-025-00698-2
Artigo de periodico
Methane-cycling microbial communities from Amazon floodplains and upland forests respond differently to simulated climate change scenarios (2024)
Gontijo, Julia Brandão ; Paula, Fabiana S ; Bieluczyk, Wanderlei ; França, Aline Giovana da ; Navroski, Deisi ; Mandro, Jéssica Adriele ; Venturini, Andressa Monteiro ; Asselta, Fernanda Ometto ; Mendes, Lucas William ; Moura, José Mauro Sousa de ; Moreira, Marcelo Zacharias ; Nusslein, Klaus ; Bohannan, Brendan J. M ; Bodelier, Paul L. E ; Rodrigues, Jorge L. Mazza ; Tsai, Siu Mui
Source: Environmental Microbiome. Unidades: CENA, ESALQ
Subjects: BIOGEOQUÍMICA, GASES, EFEITO ESTUFA, GENÔMICA, ECOLOGIA MICROBIANA, AQUECIMENTO GLOBAL
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ABNT
GONTIJO, Julia Brandão et al. Methane-cycling microbial communities from Amazon floodplains and upland forests respond differently to simulated climate change scenarios. Environmental Microbiome, v. 19, n. 48, p. 1-19, 2024Tradução . . Disponível em: https://doi.org/10.1186/s40793-024-00596-z. Acesso em: 19 abr. 2026.
APA
Gontijo, J. B., Paula, F. S., Bieluczyk, W., França, A. G. da, Navroski, D., Mandro, J. A., et al. (2024). Methane-cycling microbial communities from Amazon floodplains and upland forests respond differently to simulated climate change scenarios. Environmental Microbiome, 19( 48), 1-19. doi:10.1186/s40793-024-00596-z
NLM
Gontijo JB, Paula FS, Bieluczyk W, França AG da, Navroski D, Mandro JA, Venturini AM, Asselta FO, Mendes LW, Moura JMS de, Moreira MZ, Nusslein K, Bohannan BJM, Bodelier PLE, Rodrigues JLM, Tsai SM. Methane-cycling microbial communities from Amazon floodplains and upland forests respond differently to simulated climate change scenarios [Internet]. Environmental Microbiome. 2024 ; 19( 48): 1-19.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-024-00596-z
Vancouver
Gontijo JB, Paula FS, Bieluczyk W, França AG da, Navroski D, Mandro JA, Venturini AM, Asselta FO, Mendes LW, Moura JMS de, Moreira MZ, Nusslein K, Bohannan BJM, Bodelier PLE, Rodrigues JLM, Tsai SM. Methane-cycling microbial communities from Amazon floodplains and upland forests respond differently to simulated climate change scenarios [Internet]. Environmental Microbiome. 2024 ; 19( 48): 1-19.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-024-00596-z
Artigo de periodico
Role of Bacillus subtilis exopolymeric genes in modulating rhizosphere microbiome assembly (2024)
Nishisaka, Caroline Sayuri ; Ventura, João Paulo ; Bais, Harsh P; Mendes, Rodrigo
Source: Environmental Microbiome. Unidade: ESALQ
Subjects: BACTÉRIAS, ESTIMULANTES DE CRESCIMENTO VEGETAL, GENES, INOCULAÇÃO, MICROBIOLOGIA DO SOLO, RIZOSFERA, TOMATE
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ABNT
NISHISAKA, Caroline Sayuri et al. Role of Bacillus subtilis exopolymeric genes in modulating rhizosphere microbiome assembly. Environmental Microbiome, p. 1-17, 2024Tradução . . Disponível em: https://doi.org/10.1186/s40793-024-00567-4. Acesso em: 19 abr. 2026.
APA
Nishisaka, C. S., Ventura, J. P., Bais, H. P., & Mendes, R. (2024). Role of Bacillus subtilis exopolymeric genes in modulating rhizosphere microbiome assembly. Environmental Microbiome, 1-17. doi:10.1186/s40793-024-00567-4
NLM
Nishisaka CS, Ventura JP, Bais HP, Mendes R. Role of Bacillus subtilis exopolymeric genes in modulating rhizosphere microbiome assembly [Internet]. Environmental Microbiome. 2024 ; 1-17.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-024-00567-4
Vancouver
Nishisaka CS, Ventura JP, Bais HP, Mendes R. Role of Bacillus subtilis exopolymeric genes in modulating rhizosphere microbiome assembly [Internet]. Environmental Microbiome. 2024 ; 1-17.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-024-00567-4
Artigo de periodico
Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness (2023)
Costa, Lilian Simara Abreu Soares; Faria, Mírian Rabelo de; Chiaramonte, Josiane Barros ; Mendes, Lucas William ; Sepo, Edis; Hollander, Mattias de ; Fernandes, José Maurício Cunha ; Carrión, Víctor J ; Bettiol, Wagner ; Mauchline, Tim H ; Raaijmakers, Jos M ; Mendes, Rodrigo
Source: Environmental Microbiome. Unidade: CENA
Subjects: ECOLOGIA MICROBIANA, DOENÇAS DE PLANTAS, BIOMA, SOLOS
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ABNT
COSTA, Lilian Simara Abreu Soares et al. Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness. Environmental Microbiome, v. 18, n. 85, p. 1-15, 2023Tradução . . Disponível em: https://doi.org/10.1186/s40793-023-00529-2. Acesso em: 19 abr. 2026.
APA
Costa, L. S. A. S., Faria, M. R. de, Chiaramonte, J. B., Mendes, L. W., Sepo, E., Hollander, M. de, et al. (2023). Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness. Environmental Microbiome, 18( 85), 1-15. doi:10.1186/s40793-023-00529-2
NLM
Costa LSAS, Faria MR de, Chiaramonte JB, Mendes LW, Sepo E, Hollander M de, Fernandes JMC, Carrión VJ, Bettiol W, Mauchline TH, Raaijmakers JM, Mendes R. Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness [Internet]. Environmental Microbiome. 2023 ; 18( 85): 1-15.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-023-00529-2
Vancouver
Costa LSAS, Faria MR de, Chiaramonte JB, Mendes LW, Sepo E, Hollander M de, Fernandes JMC, Carrión VJ, Bettiol W, Mauchline TH, Raaijmakers JM, Mendes R. Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness [Internet]. Environmental Microbiome. 2023 ; 18( 85): 1-15.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-023-00529-2
Artigo de periodico
Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome (2023)
Mendes, Lucas William ; Raaijmakers, Jos M ; Hollander, Mattias de ; Sepo, Edis; Gómez Expósito, Ruth ; Chiorato, Alisson Fernando ; Mendes, Rodrigo ; Tsai, Siu Mui ; Carrión, Víctor J
Source: Environmental Microbiome. Unidade: CENA
Subjects: RIZOSFERA, ECOLOGIA MICROBIANA, GENÔMICA, FEIJÃO, EXPRESSÃO GÊNICA, BIOMA, RAIZ
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ABNT
MENDES, Lucas William et al. Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome. Environmental Microbiome, v. 18, n. 68, p. 1-17, 2023Tradução . . Disponível em: https://doi.org/10.1186/s40793-023-00524-7. Acesso em: 19 abr. 2026.
APA
Mendes, L. W., Raaijmakers, J. M., Hollander, M. de, Sepo, E., Gómez Expósito, R., Chiorato, A. F., et al. (2023). Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome. Environmental Microbiome, 18( 68), 1-17. doi:10.1186/s40793-023-00524-7
NLM
Mendes LW, Raaijmakers JM, Hollander M de, Sepo E, Gómez Expósito R, Chiorato AF, Mendes R, Tsai SM, Carrión VJ. Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome [Internet]. Environmental Microbiome. 2023 ; 18( 68): 1-17.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-023-00524-7
Vancouver
Mendes LW, Raaijmakers JM, Hollander M de, Sepo E, Gómez Expósito R, Chiorato AF, Mendes R, Tsai SM, Carrión VJ. Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome [Internet]. Environmental Microbiome. 2023 ; 18( 68): 1-17.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-023-00524-7
Artigo de periodico
MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes (2022)
Nata'ala, Muhammad Kabiru ; Santos, Anderson Paulo Avila ; Kasmanas, Jonas Coelho ; Bartholomäus, Alexander ; Saraiva, João Pedro ; Silva, Sandra Godinho ; Keller-Costa, Tina ; Costa, Rodrigo; Gomes, Newton Carlos Marcial ; Carvalho, André Carlos Ponce de Leon Ferreira de ; Stadler, Peter F ; Sanches, Danilo Sipoli ; Rocha, Ulisses Nunes da
Source: Environmental Microbiome. Unidade: ICMC
Subjects: BIOINFORMÁTICA, GENÔMICA, METADADOS, BANCO DE DADOS, ECOLOGIA MICROBIANA
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ABNT
NATA'ALA, Muhammad Kabiru et al. MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes. Environmental Microbiome, v. 17, p. 1-10, 2022Tradução . . Disponível em: https://doi.org/10.1186/s40793-022-00449-7. Acesso em: 19 abr. 2026.
APA
Nata'ala, M. K., Santos, A. P. A., Kasmanas, J. C., Bartholomäus, A., Saraiva, J. P., Silva, S. G., et al. (2022). MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes. Environmental Microbiome, 17, 1-10. doi:10.1186/s40793-022-00449-7
NLM
Nata'ala MK, Santos APA, Kasmanas JC, Bartholomäus A, Saraiva JP, Silva SG, Keller-Costa T, Costa R, Gomes NCM, Carvalho ACP de LF de, Stadler PF, Sanches DS, Rocha UN da. MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes [Internet]. Environmental Microbiome. 2022 ; 17 1-10.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-022-00449-7
Vancouver
Nata'ala MK, Santos APA, Kasmanas JC, Bartholomäus A, Saraiva JP, Silva SG, Keller-Costa T, Costa R, Gomes NCM, Carvalho ACP de LF de, Stadler PF, Sanches DS, Rocha UN da. MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes [Internet]. Environmental Microbiome. 2022 ; 17 1-10.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-022-00449-7
Artigo de periodico
PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning (2022)
Monteiro, Lummy Maria Oliveira ; Saraiva, João Pedro; Toscan, Rodolfo Brizola; Stadler, Peter F.; Silva-Rocha, Rafael ; Rocha, Ulisses Nunes da
Source: Environmental Microbiome. Unidade: FMRP
Subjects: APRENDIZADO COMPUTACIONAL, REDES NEURAIS, REGULAÇÃO GÊNICA, FATORES DE TRANSCRIÇÃO
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ABNT
MONTEIRO, Lummy Maria Oliveira et al. PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning. Environmental Microbiome, v. 17, n. 1, p. 1-11, 2022Tradução . . Disponível em: https://doi.org/10.1186/s40793-021-00394-x. Acesso em: 19 abr. 2026.
APA
Monteiro, L. M. O., Saraiva, J. P., Toscan, R. B., Stadler, P. F., Silva-Rocha, R., & Rocha, U. N. da. (2022). PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning. Environmental Microbiome, 17( 1), 1-11. doi:10.1186/s40793-021-00394-x
NLM
Monteiro LMO, Saraiva JP, Toscan RB, Stadler PF, Silva-Rocha R, Rocha UN da. PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning [Internet]. Environmental Microbiome. 2022 ; 17( 1): 1-11.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-021-00394-x
Vancouver
Monteiro LMO, Saraiva JP, Toscan RB, Stadler PF, Silva-Rocha R, Rocha UN da. PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning [Internet]. Environmental Microbiome. 2022 ; 17( 1): 1-11.[citado 2026 abr. 19 ] Available from: https://doi.org/10.1186/s40793-021-00394-x

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