ReP USP - Resultado da busca

Trabalho de evento-resumo
Pardal: a workflow for assembly and annotation on the minion platform (2024)
Tsuji, Henrique Marcel Yudi de Oliveira ; Mencucini, Luiz Gabriel Souza ; Silva, Ricardo Roberto da ; Tamasco, Gustavo ; Rocha, Rafael Silva
Source: Resumos (e-Book ). Conference titles: International Congress of the Brazilian Genetics Society - CBG. Unidades: FCFRP, FMRP, EEL
Subjects: GENÔMICA, BIOINFORMÁTICA, SEQUENCIAMENTO GENÉTICO
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TSUJI, Henrique Marcel Yudi de Oliveira et al. Pardal: a workflow for assembly and annotation on the minion platform. 2024, Anais.. Ribeirão Preto: Sociedade Brasileira de Genética (SBG), 2024. Disponível em: https://www.sbg.org.br/admin/files/book/book_bcovOe2cEJzf.pdf. Acesso em: 26 abr. 2026.
APA
Tsuji, H. M. Y. de O., Mencucini, L. G. S., Silva, R. R. da, Tamasco, G., & Rocha, R. S. (2024). Pardal: a workflow for assembly and annotation on the minion platform. In Resumos (e-Book ). Ribeirão Preto: Sociedade Brasileira de Genética (SBG). Recuperado de https://www.sbg.org.br/admin/files/book/book_bcovOe2cEJzf.pdf
NLM
Tsuji HMY de O, Mencucini LGS, Silva RR da, Tamasco G, Rocha RS. Pardal: a workflow for assembly and annotation on the minion platform [Internet]. Resumos (e-Book ). 2024 ;[citado 2026 abr. 26 ] Available from: https://www.sbg.org.br/admin/files/book/book_bcovOe2cEJzf.pdf
Vancouver
Tsuji HMY de O, Mencucini LGS, Silva RR da, Tamasco G, Rocha RS. Pardal: a workflow for assembly and annotation on the minion platform [Internet]. Resumos (e-Book ). 2024 ;[citado 2026 abr. 26 ] Available from: https://www.sbg.org.br/admin/files/book/book_bcovOe2cEJzf.pdf
Artigo de periodico
Novel pseudomonas species prevent the growth of the phytopathogenic fungus Aspergillus flavus (2024)
Oliveira, Franciene Rabiço ; Borelli, Tiago Cabral ; Alnoch, Robson Carlos ; Polizeli, Maria De Lourdes Teixeira De Moraes ; Silva, Ricardo Roberto da ; Silva-Rocha, Rafael ; Guazzaroni, Maria Eugenia
Source: BioTech. Unidades: FMRP, FFCLRP, FCFRP
Subjects: PSEUDOMONAS, COMPOSTOS VOLÁTEIS, CONTROLE BIOLÓGICO, FUNGOS, FITOPATÓGENOS
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OLIVEIRA, Franciene Rabiço et al. Novel pseudomonas species prevent the growth of the phytopathogenic fungus Aspergillus flavus. BioTech, v. 13, n. 2, p. 1-20, 2024Tradução . . Disponível em: https://doi.org/10.3390/biotech13020008. Acesso em: 26 abr. 2026.
APA
Oliveira, F. R., Borelli, T. C., Alnoch, R. C., Polizeli, M. D. L. T. D. M., Silva, R. R. da, Silva-Rocha, R., & Guazzaroni, M. E. (2024). Novel pseudomonas species prevent the growth of the phytopathogenic fungus Aspergillus flavus. BioTech, 13( 2), 1-20. doi:10.3390/biotech13020008
NLM
Oliveira FR, Borelli TC, Alnoch RC, Polizeli MDLTDM, Silva RR da, Silva-Rocha R, Guazzaroni ME. Novel pseudomonas species prevent the growth of the phytopathogenic fungus Aspergillus flavus [Internet]. BioTech. 2024 ; 13( 2): 1-20.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3390/biotech13020008
Vancouver
Oliveira FR, Borelli TC, Alnoch RC, Polizeli MDLTDM, Silva RR da, Silva-Rocha R, Guazzaroni ME. Novel pseudomonas species prevent the growth of the phytopathogenic fungus Aspergillus flavus [Internet]. BioTech. 2024 ; 13( 2): 1-20.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3390/biotech13020008
Artigo de periodico
Identification and functional analysis of novel protein-encoding sequences related to stress-resistance (2023)
Juarez, Joshelin Huanca ; Silva, Edson Alexandre do Nascimento; Silva, Ninna Hirata ; Silva-Rocha, Rafael ; Guazzaroni, Maria Eugenia
Source: Frontiers in Microbiology. Unidades: FMRP, FFCLRP
Subjects: BIOTECNOLOGIA, BIOLOGIA SINTÉTICA, ESTRESSE
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JUAREZ, Joshelin Huanca et al. Identification and functional analysis of novel protein-encoding sequences related to stress-resistance. Frontiers in Microbiology, v. 14, p. 1-11, 2023Tradução . . Disponível em: https://doi.org/10.3389/fmicb.2023.1268315. Acesso em: 26 abr. 2026.
APA
Juarez, J. H., Silva, E. A. do N., Silva, N. H., Silva-Rocha, R., & Guazzaroni, M. E. (2023). Identification and functional analysis of novel protein-encoding sequences related to stress-resistance. Frontiers in Microbiology, 14, 1-11. doi:10.3389/fmicb.2023.1268315
NLM
Juarez JH, Silva EA do N, Silva NH, Silva-Rocha R, Guazzaroni ME. Identification and functional analysis of novel protein-encoding sequences related to stress-resistance [Internet]. Frontiers in Microbiology. 2023 ; 14 1-11.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fmicb.2023.1268315
Vancouver
Juarez JH, Silva EA do N, Silva NH, Silva-Rocha R, Guazzaroni ME. Identification and functional analysis of novel protein-encoding sequences related to stress-resistance [Internet]. Frontiers in Microbiology. 2023 ; 14 1-11.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fmicb.2023.1268315
Trabalho de evento-resumo
From wilderness to bottle, microbiota analysis of the manipueira selvagem, a new wild beer from Brazil (2023)
Carvalho, Ana Carolina Souza Ramos de ; Silva-Rocha, Rafael ; Rodrigues, Fabio ; Rzatki, Diego Simão
Source: Anais. Conference titles: Congresso Brasileiro de Microbiologia/CBM. Unidades: FMRP, IQ, EACH
Subjects: CERVEJA, FERMENTAÇÃO
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CARVALHO, Ana Carolina Souza Ramos de et al. From wilderness to bottle, microbiota analysis of the manipueira selvagem, a new wild beer from Brazil. 2023, Anais.. São Paulo: Sociedade Brasileira de Microbiologia/SBM, 2023. Disponível em: https://sbmicrobiologia.org.br/32cbm-anais/resumo.htm. Acesso em: 26 abr. 2026.
APA
Carvalho, A. C. S. R. de, Silva-Rocha, R., Rodrigues, F., & Rzatki, D. S. (2023). From wilderness to bottle, microbiota analysis of the manipueira selvagem, a new wild beer from Brazil. In Anais. São Paulo: Sociedade Brasileira de Microbiologia/SBM. Recuperado de https://sbmicrobiologia.org.br/32cbm-anais/resumo.htm
NLM
Carvalho ACSR de, Silva-Rocha R, Rodrigues F, Rzatki DS. From wilderness to bottle, microbiota analysis of the manipueira selvagem, a new wild beer from Brazil [Internet]. Anais. 2023 ;[citado 2026 abr. 26 ] Available from: https://sbmicrobiologia.org.br/32cbm-anais/resumo.htm
Vancouver
Carvalho ACSR de, Silva-Rocha R, Rodrigues F, Rzatki DS. From wilderness to bottle, microbiota analysis of the manipueira selvagem, a new wild beer from Brazil [Internet]. Anais. 2023 ;[citado 2026 abr. 26 ] Available from: https://sbmicrobiologia.org.br/32cbm-anais/resumo.htm
Artigo de periodico
Mining novel cis-regulatory elements from the emergent host Rhodosporidium toruloides using transcriptomic data (2023)
Nora, Luísa Czamanski ; Cassiano, Murilo Henrique Anzolini ; Santana, Ítalo Paulino; Guazzaroni, Maria Eugenia ; Silva-Rocha, Rafael ; Silva, Ricardo Roberto da
Source: Frontiers in Microbiology. Unidades: FFCLRP, FMRP, FCFRP
Subjects: FATORES DE TRANSCRIÇÃO, SEQUENCIAMENTO GENÉTICO, RNA, CALDO DE CANA, LEVEDURAS
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NORA, Luísa Czamanski et al. Mining novel cis-regulatory elements from the emergent host Rhodosporidium toruloides using transcriptomic data. Frontiers in Microbiology, v. 13, p. 1-14, 2023Tradução . . Disponível em: https://doi.org/10.3389/fmicb.2022.1069443. Acesso em: 26 abr. 2026.
APA
Nora, L. C., Cassiano, M. H. A., Santana, Í. P., Guazzaroni, M. E., Silva-Rocha, R., & Silva, R. R. da. (2023). Mining novel cis-regulatory elements from the emergent host Rhodosporidium toruloides using transcriptomic data. Frontiers in Microbiology, 13, 1-14. doi:10.3389/fmicb.2022.1069443
NLM
Nora LC, Cassiano MHA, Santana ÍP, Guazzaroni ME, Silva-Rocha R, Silva RR da. Mining novel cis-regulatory elements from the emergent host Rhodosporidium toruloides using transcriptomic data [Internet]. Frontiers in Microbiology. 2023 ; 13 1-14.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fmicb.2022.1069443
Vancouver
Nora LC, Cassiano MHA, Santana ÍP, Guazzaroni ME, Silva-Rocha R, Silva RR da. Mining novel cis-regulatory elements from the emergent host Rhodosporidium toruloides using transcriptomic data [Internet]. Frontiers in Microbiology. 2023 ; 13 1-14.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fmicb.2022.1069443
Artigo de periodico
Nosocomial outbreak of extensively drug-resistant (polymyxin B and carbapenem) klebsiella pneumoniae in a collapsed University hospital due to COVID-19 pandemic (2022)
Gaspar, Gilberto Gambero; Tamasco, Gustavo; Abichabki, Nathália de Lima Martins ; Scaranello, Ana Flavia T.; Auxiliadora-Martins, Maria; Pocente, Renata Helena Candido; Andrade, Leonardo Neves de ; Guazzaroni, Maria Eugenia ; Silva-Rocha, Rafael; Bollela, Valdes Roberto
Source: Antibiotics. Unidades: FMRP, FCFRP, FFCLRP
Subjects: POLIMIXINAS, RESISTÊNCIA MICROBIANA ÀS DROGAS, SURTOS DE DOENÇAS, COVID-19
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ABNT
GASPAR, Gilberto Gambero et al. Nosocomial outbreak of extensively drug-resistant (polymyxin B and carbapenem) klebsiella pneumoniae in a collapsed University hospital due to COVID-19 pandemic. Antibiotics, v. 11, n. 6, p. 1-12, 2022Tradução . . Disponível em: https://doi.org/10.3390/antibiotics11060814. Acesso em: 26 abr. 2026.
APA
Gaspar, G. G., Tamasco, G., Abichabki, N. de L. M., Scaranello, A. F. T., Auxiliadora-Martins, M., Pocente, R. H. C., et al. (2022). Nosocomial outbreak of extensively drug-resistant (polymyxin B and carbapenem) klebsiella pneumoniae in a collapsed University hospital due to COVID-19 pandemic. Antibiotics, 11( 6), 1-12. doi:10.3390/antibiotics11060814
NLM
Gaspar GG, Tamasco G, Abichabki N de LM, Scaranello AFT, Auxiliadora-Martins M, Pocente RHC, Andrade LN de, Guazzaroni ME, Silva-Rocha R, Bollela VR. Nosocomial outbreak of extensively drug-resistant (polymyxin B and carbapenem) klebsiella pneumoniae in a collapsed University hospital due to COVID-19 pandemic [Internet]. Antibiotics. 2022 ; 11( 6): 1-12.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3390/antibiotics11060814
Vancouver
Gaspar GG, Tamasco G, Abichabki N de LM, Scaranello AFT, Auxiliadora-Martins M, Pocente RHC, Andrade LN de, Guazzaroni ME, Silva-Rocha R, Bollela VR. Nosocomial outbreak of extensively drug-resistant (polymyxin B and carbapenem) klebsiella pneumoniae in a collapsed University hospital due to COVID-19 pandemic [Internet]. Antibiotics. 2022 ; 11( 6): 1-12.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3390/antibiotics11060814
Artigo de periodico
PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning (2022)
Monteiro, Lummy Maria Oliveira ; Saraiva, João Pedro; Toscan, Rodolfo Brizola; Stadler, Peter F.; Silva-Rocha, Rafael ; Rocha, Ulisses Nunes da
Source: Environmental Microbiome. Unidade: FMRP
Subjects: APRENDIZADO COMPUTACIONAL, REDES NEURAIS, REGULAÇÃO GÊNICA, FATORES DE TRANSCRIÇÃO
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MONTEIRO, Lummy Maria Oliveira et al. PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning. Environmental Microbiome, v. 17, n. 1, p. 1-11, 2022Tradução . . Disponível em: https://doi.org/10.1186/s40793-021-00394-x. Acesso em: 26 abr. 2026.
APA
Monteiro, L. M. O., Saraiva, J. P., Toscan, R. B., Stadler, P. F., Silva-Rocha, R., & Rocha, U. N. da. (2022). PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning. Environmental Microbiome, 17( 1), 1-11. doi:10.1186/s40793-021-00394-x
NLM
Monteiro LMO, Saraiva JP, Toscan RB, Stadler PF, Silva-Rocha R, Rocha UN da. PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning [Internet]. Environmental Microbiome. 2022 ; 17( 1): 1-11.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1186/s40793-021-00394-x
Vancouver
Monteiro LMO, Saraiva JP, Toscan RB, Stadler PF, Silva-Rocha R, Rocha UN da. PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning [Internet]. Environmental Microbiome. 2022 ; 17( 1): 1-11.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1186/s40793-021-00394-x
Artigo de periodico
ChiMera: an easy to use pipeline for bacterial genome based metabolic network reconstruction, evaluation and visualization (2022)
Tamasco, Gustavo; Kumar, Manish; Zengler, Karsten; Silva-Rocha, Rafael ; Silva, Ricardo Roberto da
Source: BMC Bioinformatics. Unidade: FMRP
Subjects: GENOMAS, ENGENHARIA GENÉTICA, METABOLISMO
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TAMASCO, Gustavo et al. ChiMera: an easy to use pipeline for bacterial genome based metabolic network reconstruction, evaluation and visualization. BMC Bioinformatics, v. 23, p. 1-13, 2022Tradução . . Disponível em: https://doi.org/10.1186/s12859-022-05056-4. Acesso em: 26 abr. 2026.
APA
Tamasco, G., Kumar, M., Zengler, K., Silva-Rocha, R., & Silva, R. R. da. (2022). ChiMera: an easy to use pipeline for bacterial genome based metabolic network reconstruction, evaluation and visualization. BMC Bioinformatics, 23, 1-13. doi:10.1186/s12859-022-05056-4
NLM
Tamasco G, Kumar M, Zengler K, Silva-Rocha R, Silva RR da. ChiMera: an easy to use pipeline for bacterial genome based metabolic network reconstruction, evaluation and visualization [Internet]. BMC Bioinformatics. 2022 ; 23 1-13.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1186/s12859-022-05056-4
Vancouver
Tamasco G, Kumar M, Zengler K, Silva-Rocha R, Silva RR da. ChiMera: an easy to use pipeline for bacterial genome based metabolic network reconstruction, evaluation and visualization [Internet]. BMC Bioinformatics. 2022 ; 23 1-13.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1186/s12859-022-05056-4
Artigo de periodico
Chromatin profiling reveals heterogeneity in clinical isolates of the human pathogen Aspergillus fumigatus (2022)
Colabardini, Ana Cristina ; Wang, Fang; Miao, Zhengqiang; Pardeshi, Lakhansing; Fernández, Clara Isabel Valero ; Castro, Patrícia Alves de; Akiyama, Daniel Yuri; Tan, Kaeling; Nora, Luísa Czamanski ; Silva-Rocha, Rafael ; Marcet-Houben, Marina; Gabaldon, Toni; Fill, Taicia; Wong, Koon Ho; Goldman, Gustavo Henrique
Source: PLOS Genetics. Unidades: FMRP, FCFRP
Subjects: CROMATINA, GENOMAS, ASPERGILLUS
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COLABARDINI, Ana Cristina et al. Chromatin profiling reveals heterogeneity in clinical isolates of the human pathogen Aspergillus fumigatus. PLOS Genetics, v. 18, n. 1, p. 1-36, 2022Tradução . . Disponível em: https://doi.org/10.1371/journal.pgen.1010001. Acesso em: 26 abr. 2026.
APA
Colabardini, A. C., Wang, F., Miao, Z., Pardeshi, L., Fernández, C. I. V., Castro, P. A. de, et al. (2022). Chromatin profiling reveals heterogeneity in clinical isolates of the human pathogen Aspergillus fumigatus. PLOS Genetics, 18( 1), 1-36. doi:10.1371/journal.pgen.1010001
NLM
Colabardini AC, Wang F, Miao Z, Pardeshi L, Fernández CIV, Castro PA de, Akiyama DY, Tan K, Nora LC, Silva-Rocha R, Marcet-Houben M, Gabaldon T, Fill T, Wong KH, Goldman GH. Chromatin profiling reveals heterogeneity in clinical isolates of the human pathogen Aspergillus fumigatus [Internet]. PLOS Genetics. 2022 ; 18( 1): 1-36.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1371/journal.pgen.1010001
Vancouver
Colabardini AC, Wang F, Miao Z, Pardeshi L, Fernández CIV, Castro PA de, Akiyama DY, Tan K, Nora LC, Silva-Rocha R, Marcet-Houben M, Gabaldon T, Fill T, Wong KH, Goldman GH. Chromatin profiling reveals heterogeneity in clinical isolates of the human pathogen Aspergillus fumigatus [Internet]. PLOS Genetics. 2022 ; 18( 1): 1-36.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1371/journal.pgen.1010001
Artigo de periodico
Association of JAK/STAT genetic variants with cutaneous melanoma (2022)
Gomez, Gabriela Vilas Bôas; Lourenço, Gustavo Jacob; Monteiro, Lummy Maria Oliveira ; Rocha, Rafael Silva ; Fernández, Kimberly Anne McGrail; Recio, Juan Angel; Torricelli, Caroline; Coser, Lilian Oliveira; Oliveira, Alexandre Leite Rodrigues de; Carron, Juliana; Moraes, Aparecida Machado de; Lima, Carmen Silvia Passos
Source: Frontiers in Oncology. Unidades: FMRP, FM
Subjects: MELANOMA, VARIAÇÃO GENÉTICA, TRANSDUÇÃO DE SINAL CELULAR, PROGNÓSTICO, NUCLEOTÍDEOS
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GOMEZ, Gabriela Vilas Bôas et al. Association of JAK/STAT genetic variants with cutaneous melanoma. Frontiers in Oncology, v. 12, p. 1-19, 2022Tradução . . Disponível em: https://doi.org/10.3389/fonc.2022.943483. Acesso em: 26 abr. 2026.
APA
Gomez, G. V. B., Lourenço, G. J., Monteiro, L. M. O., Rocha, R. S., Fernández, K. A. M. G., Recio, J. A., et al. (2022). Association of JAK/STAT genetic variants with cutaneous melanoma. Frontiers in Oncology, 12, 1-19. doi:10.3389/fonc.2022.943483
NLM
Gomez GVB, Lourenço GJ, Monteiro LMO, Rocha RS, Fernández KAMG, Recio JA, Torricelli C, Coser LO, Oliveira ALR de, Carron J, Moraes AM de, Lima CSP. Association of JAK/STAT genetic variants with cutaneous melanoma [Internet]. Frontiers in Oncology. 2022 ; 12 1-19.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fonc.2022.943483
Vancouver
Gomez GVB, Lourenço GJ, Monteiro LMO, Rocha RS, Fernández KAMG, Recio JA, Torricelli C, Coser LO, Oliveira ALR de, Carron J, Moraes AM de, Lima CSP. Association of JAK/STAT genetic variants with cutaneous melanoma [Internet]. Frontiers in Oncology. 2022 ; 12 1-19.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fonc.2022.943483
Artigo de periodico
Adding value to lignocellulosic byproducts by using acetate and p-coumaric acid as substrate in a microbial fuel cell (2021)
Mancílio, Lucca Bonjy Kikuti ; Ribeiro, Guilherme Augusto; Almeida, Erica Janaina Rodrigues de; Siqueira, Guilherme Marcelino Viana de; Silva-Rocha, Rafael; Guazzaroni, Maria Eugenia ; Andrade, Adalgisa Rodrigues de ; Reginatto, Valeria
Source: Industrial Crops and Products. Unidades: FMRP, FFCLRP
Subjects: BIOMASSA, CÉLULAS A COMBUSTÍVEL, ELETROFISIOLOGIA, PSEUDOMONAS
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ABNT
MANCÍLIO, Lucca Bonjy Kikuti et al. Adding value to lignocellulosic byproducts by using acetate and p-coumaric acid as substrate in a microbial fuel cell. Industrial Crops and Products, v. 171, 2021Tradução . . Disponível em: https://doi.org/10.1016/j.indcrop.2021.113844. Acesso em: 26 abr. 2026.
APA
Mancílio, L. B. K., Ribeiro, G. A., Almeida, E. J. R. de, Siqueira, G. M. V. de, Silva-Rocha, R., Guazzaroni, M. E., et al. (2021). Adding value to lignocellulosic byproducts by using acetate and p-coumaric acid as substrate in a microbial fuel cell. Industrial Crops and Products, 171. doi:10.1016/j.indcrop.2021.113844
NLM
Mancílio LBK, Ribeiro GA, Almeida EJR de, Siqueira GMV de, Silva-Rocha R, Guazzaroni ME, Andrade AR de, Reginatto V. Adding value to lignocellulosic byproducts by using acetate and p-coumaric acid as substrate in a microbial fuel cell [Internet]. Industrial Crops and Products. 2021 ; 171[citado 2026 abr. 26 ] Available from: https://doi.org/10.1016/j.indcrop.2021.113844
Vancouver
Mancílio LBK, Ribeiro GA, Almeida EJR de, Siqueira GMV de, Silva-Rocha R, Guazzaroni ME, Andrade AR de, Reginatto V. Adding value to lignocellulosic byproducts by using acetate and p-coumaric acid as substrate in a microbial fuel cell [Internet]. Industrial Crops and Products. 2021 ; 171[citado 2026 abr. 26 ] Available from: https://doi.org/10.1016/j.indcrop.2021.113844
Artigo de periodico
Standardization of inducer-activated broad host range expression modules: debugging and refactoring an alkane-responsive AlkS/PalkB device (2021)
Arce-Rodríguez, Alejandro; Benedetti, Ilaria; Acuña, Jose Manuel Borrero de; Silva-Rocha, Rafael; Lorenzo, Víctor de
Source: Synthetic Biology. Unidade: FMRP
Subjects: PSEUDOMONAS, CITOMETRIA DE FLUXO, DNA RECOMBINANTE, EXPRESSÃO GÊNICA
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ABNT
ARCE-RODRÍGUEZ, Alejandro et al. Standardization of inducer-activated broad host range expression modules: debugging and refactoring an alkane-responsive AlkS/PalkB device. Synthetic Biology, v. 6, n. 1, 2021Tradução . . Disponível em: https://doi.org/10.1093/synbio/ysab030. Acesso em: 26 abr. 2026.
APA
Arce-Rodríguez, A., Benedetti, I., Acuña, J. M. B. de, Silva-Rocha, R., & Lorenzo, V. de. (2021). Standardization of inducer-activated broad host range expression modules: debugging and refactoring an alkane-responsive AlkS/PalkB device. Synthetic Biology, 6( 1). doi:10.1093/synbio/ysab030
NLM
Arce-Rodríguez A, Benedetti I, Acuña JMB de, Silva-Rocha R, Lorenzo V de. Standardization of inducer-activated broad host range expression modules: debugging and refactoring an alkane-responsive AlkS/PalkB device [Internet]. Synthetic Biology. 2021 ; 6( 1):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1093/synbio/ysab030
Vancouver
Arce-Rodríguez A, Benedetti I, Acuña JMB de, Silva-Rocha R, Lorenzo V de. Standardization of inducer-activated broad host range expression modules: debugging and refactoring an alkane-responsive AlkS/PalkB device [Internet]. Synthetic Biology. 2021 ; 6( 1):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1093/synbio/ysab030
Artigo de periodico
Nanopore sequencing provides rapid and reliable insight into microbial profiles of intensive care units (2021)
Siqueira, Guilherme Marcelino Viana de; Pereira-dos-Santos, Felipe Marcelo; Silva-Rocha, Rafael; Guazzaroni, Maria Eugenia
Source: Frontiers in Public Health. Unidades: FMRP, FFCLRP
Subjects: UNIDADES DE TERAPIA INTENSIVA, BACTÉRIAS, MONITORAMENTO AMBIENTAL, SEQUENCIAMENTO GENÉTICO, NUCLEOTÍDEOS
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ABNT
SIQUEIRA, Guilherme Marcelino Viana de et al. Nanopore sequencing provides rapid and reliable insight into microbial profiles of intensive care units. Frontiers in Public Health, v. 9, 2021Tradução . . Disponível em: https://doi.org/10.3389/fpubh.2021.710985. Acesso em: 26 abr. 2026.
APA
Siqueira, G. M. V. de, Pereira-dos-Santos, F. M., Silva-Rocha, R., & Guazzaroni, M. E. (2021). Nanopore sequencing provides rapid and reliable insight into microbial profiles of intensive care units. Frontiers in Public Health, 9. doi:10.3389/fpubh.2021.710985
NLM
Siqueira GMV de, Pereira-dos-Santos FM, Silva-Rocha R, Guazzaroni ME. Nanopore sequencing provides rapid and reliable insight into microbial profiles of intensive care units [Internet]. Frontiers in Public Health. 2021 ; 9[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fpubh.2021.710985
Vancouver
Siqueira GMV de, Pereira-dos-Santos FM, Silva-Rocha R, Guazzaroni ME. Nanopore sequencing provides rapid and reliable insight into microbial profiles of intensive care units [Internet]. Frontiers in Public Health. 2021 ; 9[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fpubh.2021.710985
Artigo de periodico
Picking the right metaphors for addressing microbial systems: economic theory helps understanding biological complexity (2021)
Kim, Juhyun; Silva-Rocha, Rafael ; Lorenzo, Víctor de
Source: International Microbiology. Unidade: FMRP
Subjects: REDES DE COMPUTADORES, BIOLOGIA, MICROBIOLOGIA, SISTEMAS E PROCESSOS CONSTRUTIVOS
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ABNT
KIM, Juhyun e SILVA-ROCHA, Rafael e LORENZO, Víctor de. Picking the right metaphors for addressing microbial systems: economic theory helps understanding biological complexity. International Microbiology, v. 24, n. 4, p. 507-519, 2021Tradução . . Disponível em: https://doi.org/10.1007/s10123-021-00194-w. Acesso em: 26 abr. 2026.
APA
Kim, J., Silva-Rocha, R., & Lorenzo, V. de. (2021). Picking the right metaphors for addressing microbial systems: economic theory helps understanding biological complexity. International Microbiology, 24( 4), 507-519. doi:10.1007/s10123-021-00194-w
NLM
Kim J, Silva-Rocha R, Lorenzo V de. Picking the right metaphors for addressing microbial systems: economic theory helps understanding biological complexity [Internet]. International Microbiology. 2021 ; 24( 4): 507-519.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1007/s10123-021-00194-w
Vancouver
Kim J, Silva-Rocha R, Lorenzo V de. Picking the right metaphors for addressing microbial systems: economic theory helps understanding biological complexity [Internet]. International Microbiology. 2021 ; 24( 4): 507-519.[citado 2026 abr. 26 ] Available from: https://doi.org/10.1007/s10123-021-00194-w
Artigo de periodico
Analysis of the phosphorylome of Trichoderma reesei cultivated on sugarcane bagasse suggests post-translational regulation of the secreted glycosyl hydrolase Cel7A (2021)
Pedersoli, Wellington Ramos; Paula, Renato Graciano de; Antonieto, Amanda Cristina Campos; Carraro, Cláudia Batista; Taveira, Iasmin Cartaxo; Maués, David Batista; Martins, Maíra Pompeu ; Ribeiro, Liliane Fraga Costa; Damásio, André Ricardo de Lima; Silva-Rocha, Rafael; Rossi, Antônio ; Silva, Roberto do Nascimento
Source: Biotechnology Reports. Unidade: FMRP
Subjects: TRICHODERMA, BAGAÇOS, CANA-DE-AÇÚCAR, PROTEÍNAS
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ABNT
PEDERSOLI, Wellington Ramos et al. Analysis of the phosphorylome of Trichoderma reesei cultivated on sugarcane bagasse suggests post-translational regulation of the secreted glycosyl hydrolase Cel7A. Biotechnology Reports, v. 31, 2021Tradução . . Disponível em: https://doi.org/10.1016/j.btre.2021.e00652. Acesso em: 26 abr. 2026.
APA
Pedersoli, W. R., Paula, R. G. de, Antonieto, A. C. C., Carraro, C. B., Taveira, I. C., Maués, D. B., et al. (2021). Analysis of the phosphorylome of Trichoderma reesei cultivated on sugarcane bagasse suggests post-translational regulation of the secreted glycosyl hydrolase Cel7A. Biotechnology Reports, 31. doi:10.1016/j.btre.2021.e00652
NLM
Pedersoli WR, Paula RG de, Antonieto ACC, Carraro CB, Taveira IC, Maués DB, Martins MP, Ribeiro LFC, Damásio AR de L, Silva-Rocha R, Rossi A, Silva R do N. Analysis of the phosphorylome of Trichoderma reesei cultivated on sugarcane bagasse suggests post-translational regulation of the secreted glycosyl hydrolase Cel7A [Internet]. Biotechnology Reports. 2021 ; 31[citado 2026 abr. 26 ] Available from: https://doi.org/10.1016/j.btre.2021.e00652
Vancouver
Pedersoli WR, Paula RG de, Antonieto ACC, Carraro CB, Taveira IC, Maués DB, Martins MP, Ribeiro LFC, Damásio AR de L, Silva-Rocha R, Rossi A, Silva R do N. Analysis of the phosphorylome of Trichoderma reesei cultivated on sugarcane bagasse suggests post-translational regulation of the secreted glycosyl hydrolase Cel7A [Internet]. Biotechnology Reports. 2021 ; 31[citado 2026 abr. 26 ] Available from: https://doi.org/10.1016/j.btre.2021.e00652
Artigo de periodico
Combining functional genomics and whole-genome sequencing to detect antibiotic resistance genes in bacterial strains co-occurring simultaneously in a Brazilian hospital (2021)
Borelli, Tiago Cabral; Lovate, Gabriel Lencioni ; Scaranello, Ana Flavia Tonelli ; Ribeiro, Lucas Ferreira ; Zaramela, Livia; Pereira-dos-Santos, Felipe Marcelo; Silva-Rocha, Rafael ; Guazzaroni, María Eugenia
Source: Antibiotics. Unidades: FMRP, FFCLRP
Subjects: GENOMAS, GENÔMICA, ANTIBIÓTICOS, MEDICAMENTO, RESISTÊNCIA MICROBIANA ÀS DROGAS, UNIDADES DE TERAPIA INTENSIVA
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ABNT
BORELLI, Tiago Cabral et al. Combining functional genomics and whole-genome sequencing to detect antibiotic resistance genes in bacterial strains co-occurring simultaneously in a Brazilian hospital. Antibiotics, v. 10, n. 4, p. 1-19, 2021Tradução . . Disponível em: https://doi.org/10.3390/antibiotics10040419. Acesso em: 26 abr. 2026.
APA
Borelli, T. C., Lovate, G. L., Scaranello, A. F. T., Ribeiro, L. F., Zaramela, L., Pereira-dos-Santos, F. M., et al. (2021). Combining functional genomics and whole-genome sequencing to detect antibiotic resistance genes in bacterial strains co-occurring simultaneously in a Brazilian hospital. Antibiotics, 10( 4), 1-19. doi:10.3390/antibiotics10040419
NLM
Borelli TC, Lovate GL, Scaranello AFT, Ribeiro LF, Zaramela L, Pereira-dos-Santos FM, Silva-Rocha R, Guazzaroni ME. Combining functional genomics and whole-genome sequencing to detect antibiotic resistance genes in bacterial strains co-occurring simultaneously in a Brazilian hospital [Internet]. Antibiotics. 2021 ; 10( 4): 1-19.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3390/antibiotics10040419
Vancouver
Borelli TC, Lovate GL, Scaranello AFT, Ribeiro LF, Zaramela L, Pereira-dos-Santos FM, Silva-Rocha R, Guazzaroni ME. Combining functional genomics and whole-genome sequencing to detect antibiotic resistance genes in bacterial strains co-occurring simultaneously in a Brazilian hospital [Internet]. Antibiotics. 2021 ; 10( 4): 1-19.[citado 2026 abr. 26 ] Available from: https://doi.org/10.3390/antibiotics10040419
Artigo de periodico
Functional characterization of clinical isolates of the opportunistic fungal pathogen Aspergillus nidulans (2020)
Bastos, Rafael Wesley; Valero, Clara; Silva, Lilian Pereira ; Schoen, Taylor; Drott, Milton; Brauer, Verônica; Silva-Rocha, Rafael ; Lind, Abigail; Steenwyk, Jacob L. ; Rokas, Antonis ; Rodrigues, Fernando ; Resendiz-Sharpe, Agustin; Lagrou, Katrien; Marcet-Houben, Marina; Gabaldón, Toni; McDonnell, Erin; Reid, Ian; Tsang, Adrian; Oakley, Berl R.; Loures, Flávio Vieira ; Almeida, Fausto Bruno dos Reis ; Huttenlocher, Anna; Keller, Nancy P.; Ries, Laure Nicolas Annick ; Goldman, Gustavo Henrique
Source: mSphere. Unidades: FMRP, FCFRP
Subjects: ASPERGILLUS, SEQUENCIAMENTO GENÉTICO, METABOLÔMICA, ASPERGILOSE ANIMAL, FAGOCITOSE, VIRULÊNCIA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
BASTOS, Rafael Wesley et al. Functional characterization of clinical isolates of the opportunistic fungal pathogen Aspergillus nidulans. mSphere, v. 5, n. 2, 2020Tradução . . Disponível em: https://doi.org/10.1128/mSphere.00153-20. Acesso em: 26 abr. 2026.
APA
Bastos, R. W., Valero, C., Silva, L. P., Schoen, T., Drott, M., Brauer, V., et al. (2020). Functional characterization of clinical isolates of the opportunistic fungal pathogen Aspergillus nidulans. mSphere, 5( 2). doi:10.1128/mSphere.00153-20
NLM
Bastos RW, Valero C, Silva LP, Schoen T, Drott M, Brauer V, Silva-Rocha R, Lind A, Steenwyk JL, Rokas A, Rodrigues F, Resendiz-Sharpe A, Lagrou K, Marcet-Houben M, Gabaldón T, McDonnell E, Reid I, Tsang A, Oakley BR, Loures FV, Almeida FB dos R, Huttenlocher A, Keller NP, Ries LNA, Goldman GH. Functional characterization of clinical isolates of the opportunistic fungal pathogen Aspergillus nidulans [Internet]. mSphere. 2020 ; 5( 2):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1128/mSphere.00153-20
Vancouver
Bastos RW, Valero C, Silva LP, Schoen T, Drott M, Brauer V, Silva-Rocha R, Lind A, Steenwyk JL, Rokas A, Rodrigues F, Resendiz-Sharpe A, Lagrou K, Marcet-Houben M, Gabaldón T, McDonnell E, Reid I, Tsang A, Oakley BR, Loures FV, Almeida FB dos R, Huttenlocher A, Keller NP, Ries LNA, Goldman GH. Functional characterization of clinical isolates of the opportunistic fungal pathogen Aspergillus nidulans [Internet]. mSphere. 2020 ; 5( 2):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1128/mSphere.00153-20
Artigo de periodico
The Aspergillus fumigatus phosphoproteome reveals roles of high-osmolarity glycerol mitogen-activated protein kinases in promoting cell wall damage and caspofungin tolerance (2020)
Mattos, Eliciane Cevolani; Silva, Lilian Pereira ; Valero, Clara; Castro, Patrícia Alves de; Reis, Thaila Fernanda dos ; Ribeiro, Liliane Fraga Costa ; Marten, Mark R.; Silva-Rocha, Rafael ; Westmann, Cauã Antunes ; Silva, Carlos Henrique Tomich de Paula da ; Taft, Carlton Anthony; Al-Furaiji, Narjes; Bromley, Michael; Mortensen, Uffe H.; Benz, J. Philipp; Brown, Neil Andrew ; Goldman, Gustavo Henrique
Source: mBio. Unidades: FCFRP, FMRP
Subjects: ANTIFÚNGICOS, FARMACOLOGIA, ASPERGILLUS, ENZIMOLOGIA, REGULAÇÃO GÊNICA, PROTEÍNAS QUINASES, TRANSDUÇÃO DE SINAL CELULAR
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
MATTOS, Eliciane Cevolani et al. The Aspergillus fumigatus phosphoproteome reveals roles of high-osmolarity glycerol mitogen-activated protein kinases in promoting cell wall damage and caspofungin tolerance. mBio, v. 11, n. 1, 2020Tradução . . Disponível em: https://doi.org/10.1128/mBio.02962-19. Acesso em: 26 abr. 2026.
APA
Mattos, E. C., Silva, L. P., Valero, C., Castro, P. A. de, Reis, T. F. dos, Ribeiro, L. F. C., et al. (2020). The Aspergillus fumigatus phosphoproteome reveals roles of high-osmolarity glycerol mitogen-activated protein kinases in promoting cell wall damage and caspofungin tolerance. mBio, 11( 1). doi:10.1128/mBio.02962-19
NLM
Mattos EC, Silva LP, Valero C, Castro PA de, Reis TF dos, Ribeiro LFC, Marten MR, Silva-Rocha R, Westmann CA, Silva CHT de P da, Taft CA, Al-Furaiji N, Bromley M, Mortensen UH, Benz JP, Brown NA, Goldman GH. The Aspergillus fumigatus phosphoproteome reveals roles of high-osmolarity glycerol mitogen-activated protein kinases in promoting cell wall damage and caspofungin tolerance [Internet]. mBio. 2020 ; 11( 1):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1128/mBio.02962-19
Vancouver
Mattos EC, Silva LP, Valero C, Castro PA de, Reis TF dos, Ribeiro LFC, Marten MR, Silva-Rocha R, Westmann CA, Silva CHT de P da, Taft CA, Al-Furaiji N, Bromley M, Mortensen UH, Benz JP, Brown NA, Goldman GH. The Aspergillus fumigatus phosphoproteome reveals roles of high-osmolarity glycerol mitogen-activated protein kinases in promoting cell wall damage and caspofungin tolerance [Internet]. mBio. 2020 ; 11( 1):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1128/mBio.02962-19
Artigo de periodico
Unraveling the complex interplay of Fis and IHF through synthetic promoter engineering (2020)
Monteiro, Lummy Maria Oliveira; Sanches-Medeiros, Ananda; Westmann, Cauã Antunes; Silva-Rocha, Rafael
Source: Frontiers in Bioengineering and Biotechnology. Unidade: FMRP
Subjects: BACTÉRIAS, FATORES DE TRANSCRIÇÃO, ESCHERICHIA COLI
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ABNT
MONTEIRO, Lummy Maria Oliveira et al. Unraveling the complex interplay of Fis and IHF through synthetic promoter engineering. Frontiers in Bioengineering and Biotechnology, v. 8, 2020Tradução . . Disponível em: https://doi.org/10.3389/fbioe.2020.00510. Acesso em: 26 abr. 2026.
APA
Monteiro, L. M. O., Sanches-Medeiros, A., Westmann, C. A., & Silva-Rocha, R. (2020). Unraveling the complex interplay of Fis and IHF through synthetic promoter engineering. Frontiers in Bioengineering and Biotechnology, 8. doi:10.3389/fbioe.2020.00510
NLM
Monteiro LMO, Sanches-Medeiros A, Westmann CA, Silva-Rocha R. Unraveling the complex interplay of Fis and IHF through synthetic promoter engineering [Internet]. Frontiers in Bioengineering and Biotechnology. 2020 ; 8[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fbioe.2020.00510
Vancouver
Monteiro LMO, Sanches-Medeiros A, Westmann CA, Silva-Rocha R. Unraveling the complex interplay of Fis and IHF through synthetic promoter engineering [Internet]. Frontiers in Bioengineering and Biotechnology. 2020 ; 8[citado 2026 abr. 26 ] Available from: https://doi.org/10.3389/fbioe.2020.00510
Artigo de periodico
CRZ1 regulator and calcium cooperatively modulate holocellulases gene expression in Trichoderma reesei QM6a (2020)
Santana, Leonardo Martins ; Paula, Renato Graciano de ; Silva, Adriano Gomes; Lopes, Douglas Christian Borges ; Silva, Roberto do Nascimento ; Silva-Rocha, Rafael
Source: Genetics and Molecular Biology. Unidade: FMRP
Subjects: REGULAÇÃO GÊNICA, TRICHODERMA, ENZIMAS CELULOLÍTICAS
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ABNT
SANTANA, Leonardo Martins et al. CRZ1 regulator and calcium cooperatively modulate holocellulases gene expression in Trichoderma reesei QM6a. Genetics and Molecular Biology, v. 43, n. 2, 2020Tradução . . Disponível em: https://doi.org/10.1590/1678-4685-GMB-2019-0244. Acesso em: 26 abr. 2026.
APA
Santana, L. M., Paula, R. G. de, Silva, A. G., Lopes, D. C. B., Silva, R. do N., & Silva-Rocha, R. (2020). CRZ1 regulator and calcium cooperatively modulate holocellulases gene expression in Trichoderma reesei QM6a. Genetics and Molecular Biology, 43( 2). doi:10.1590/1678-4685-GMB-2019-0244
NLM
Santana LM, Paula RG de, Silva AG, Lopes DCB, Silva R do N, Silva-Rocha R. CRZ1 regulator and calcium cooperatively modulate holocellulases gene expression in Trichoderma reesei QM6a [Internet]. Genetics and Molecular Biology. 2020 ; 43( 2):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1590/1678-4685-GMB-2019-0244
Vancouver
Santana LM, Paula RG de, Silva AG, Lopes DCB, Silva R do N, Silva-Rocha R. CRZ1 regulator and calcium cooperatively modulate holocellulases gene expression in Trichoderma reesei QM6a [Internet]. Genetics and Molecular Biology. 2020 ; 43( 2):[citado 2026 abr. 26 ] Available from: https://doi.org/10.1590/1678-4685-GMB-2019-0244

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