GenSeed-HMM: a tool for progressive assembly using profile HMMs as seeds and its application in Alpavirinae viral discovery from metagenomic data - Alves, João Marcelo Pereira; Oliveira, Andre L. de; Sandberg, Tatiana Orli Milkewitz; Moreno-Gallego, Jaime L; Toledo, Marcelo A. F. de; Moura, Elisabeth M. M. de; Oliveira, Liliane S; Durham, Alan Mitchell; Mehnert, Dolores Ursula; Zanotto, Paolo Marinho de Andrade; Reyes, Alejandro; Gruber, Arthur (Frontiers in Microbiology, 2016)