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Artigo de periodico
Integrating sequence- and structure-based similarity metrics for the demarcation of multiple viral taxonomic levels (2025)
Santos, Igor Chagas ; Souza, Rebecca di Stephano de ; Tolstoy, Igor ; Oliveira, Liliane Santana; Gruber, Arthur
Fonte: Viruses. Unidades: ICB, IB, ICMC
Assuntos: PARASITOLOGIA, BIOINFORMÁTICA, EVOLUÇÃO MOLECULAR, GENOMAS, FILOGENIA, VÍRUS, ZOOLOGIA (CLASSIFICAÇÃO)
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
SANTOS, Igor Chagas et al. Integrating sequence- and structure-based similarity metrics for the demarcation of multiple viral taxonomic levels. Viruses, v. 17, n. 5, p. 27 , 2025Tradução . . Disponível em: https://doi.org/10.3390/v17050642. Acesso em: 23 nov. 2025.
APA
Santos, I. C., Souza, R. di S. de, Tolstoy, I., Oliveira, L. S., & Gruber, A. (2025). Integrating sequence- and structure-based similarity metrics for the demarcation of multiple viral taxonomic levels. Viruses, 17( 5), 27 . doi:10.3390/v17050642
NLM
Santos IC, Souza R di S de, Tolstoy I, Oliveira LS, Gruber A. Integrating sequence- and structure-based similarity metrics for the demarcation of multiple viral taxonomic levels [Internet]. Viruses. 2025 ; 17( 5): 27 .[citado 2025 nov. 23 ] Available from: https://doi.org/10.3390/v17050642
Vancouver
Santos IC, Souza R di S de, Tolstoy I, Oliveira LS, Gruber A. Integrating sequence- and structure-based similarity metrics for the demarcation of multiple viral taxonomic levels [Internet]. Viruses. 2025 ; 17( 5): 27 .[citado 2025 nov. 23 ] Available from: https://doi.org/10.3390/v17050642
Parte de monografia/livro
Rational design of profile hidden Markov models for viral classification and discovery (2021)
Oliveira, Liliane Santana; Gruber, Arthur
Fonte: Bioinformatics [Internet]. Unidade: ICB
Assuntos: PARASITOLOGIA, VIROLOGIA MOLECULAR, MODELOS ANIMAIS DE DOENÇAS, VÍRUS, BIOINFORMÁTICA, DIVERSIDADE GENÉTICA, SEQUENCIAMENTO GENÉTICO, MUTAÇÃO GENÉTICA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
OLIVEIRA, Liliane Santana e GRUBER, Arthur. Rational design of profile hidden Markov models for viral classification and discovery. Bioinformatics [Internet]. Tradução . Brisbane: Exon Publication, 2021. p. ca 9. Disponível em: https://doi.org/10.36255/exonpublications.bioinformatics.2021.ch9. Acesso em: 23 nov. 2025.
APA
Oliveira, L. S., & Gruber, A. (2021). Rational design of profile hidden Markov models for viral classification and discovery. In Bioinformatics [Internet] (p. ca 9). Brisbane: Exon Publication. doi:10.36255/exonpublications.bioinformatics.2021.ch9
NLM
Oliveira LS, Gruber A. Rational design of profile hidden Markov models for viral classification and discovery [Internet]. In: Bioinformatics [Internet]. Brisbane: Exon Publication; 2021. p. ca 9.[citado 2025 nov. 23 ] Available from: https://doi.org/10.36255/exonpublications.bioinformatics.2021.ch9
Vancouver
Oliveira LS, Gruber A. Rational design of profile hidden Markov models for viral classification and discovery [Internet]. In: Bioinformatics [Internet]. Brisbane: Exon Publication; 2021. p. ca 9.[citado 2025 nov. 23 ] Available from: https://doi.org/10.36255/exonpublications.bioinformatics.2021.ch9
Artigo de periodico
GenSeed-HMM: a tool for progressive assembly using profile HMMs as seeds and its application in Alpavirinae viral discovery from metagenomic data (2016)
Alves, João Marcelo Pereira ; Oliveira, Andre L. de; Sandberg, Tatiana Orli Milkewitz ; Moreno-Gallego, Jaime L; Toledo, Marcelo A. F. de; Moura, Elisabeth M. M. de; Oliveira, Liliane S; Durham, Alan Mitchell ; Mehnert, Dolores Ursula; Zanotto, Paolo Marinho de Andrade ; Reyes, Alejandro; Gruber, Arthur
Fonte: Frontiers in Microbiology. Unidades: ICB, IME, IB
Assuntos: BIOINFORMÁTICA, PROCESSOS DE MARKOV
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
ALVES, João Marcelo Pereira et al. GenSeed-HMM: a tool for progressive assembly using profile HMMs as seeds and its application in Alpavirinae viral discovery from metagenomic data. Frontiers in Microbiology, v. 7, n. article º 269, p. 15 , 2016Tradução . . Disponível em: https://doi.org/10.3389/fmicb.2016.00269. Acesso em: 23 nov. 2025.
APA
Alves, J. M. P., Oliveira, A. L. de, Sandberg, T. O. M., Moreno-Gallego, J. L., Toledo, M. A. F. de, Moura, E. M. M. de, et al. (2016). GenSeed-HMM: a tool for progressive assembly using profile HMMs as seeds and its application in Alpavirinae viral discovery from metagenomic data. Frontiers in Microbiology, 7( article º 269), 15 . doi:10.3389/fmicb.2016.00269
NLM
Alves JMP, Oliveira AL de, Sandberg TOM, Moreno-Gallego JL, Toledo MAF de, Moura EMM de, Oliveira LS, Durham AM, Mehnert DU, Zanotto PM de A, Reyes A, Gruber A. GenSeed-HMM: a tool for progressive assembly using profile HMMs as seeds and its application in Alpavirinae viral discovery from metagenomic data [Internet]. Frontiers in Microbiology. 2016 ; 7( article º 269): 15 .[citado 2025 nov. 23 ] Available from: https://doi.org/10.3389/fmicb.2016.00269
Vancouver
Alves JMP, Oliveira AL de, Sandberg TOM, Moreno-Gallego JL, Toledo MAF de, Moura EMM de, Oliveira LS, Durham AM, Mehnert DU, Zanotto PM de A, Reyes A, Gruber A. GenSeed-HMM: a tool for progressive assembly using profile HMMs as seeds and its application in Alpavirinae viral discovery from metagenomic data [Internet]. Frontiers in Microbiology. 2016 ; 7( article º 269): 15 .[citado 2025 nov. 23 ] Available from: https://doi.org/10.3389/fmicb.2016.00269
Parte de monografia/livro-apres/pref/posf
This book is the result of a long process that began with a series of Latin American Bioinformatics Training Courses for Tropical Disease Research. [Prefácio] (2008)
Gruber, Arthur ; Durham, Alan Mitchell ; Huynh, Chuong
Fonte: Bioinformatics in tropical disease research: a practical and case-study approach. Unidades: ICB, IME
Assunto: BIOINFORMÁTICA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
GRUBER, Arthur e DURHAM, Alan Mitchell e HUYNH, Chuong. This book is the result of a long process that began with a series of Latin American Bioinformatics Training Courses for Tropical Disease Research. [Prefácio]. Bioinformatics in tropical disease research: a practical and case-study approach. Bethesda: National Center for Biotechnology Information. Disponível em: https://www.ncbi.nlm.nih.gov/books/NBK6826/pdf/Bookshelf_NBK6826.pdf. Acesso em: 23 nov. 2025. , 2008
APA
Gruber, A., Durham, A. M., & Huynh, C. (2008). This book is the result of a long process that began with a series of Latin American Bioinformatics Training Courses for Tropical Disease Research. [Prefácio]. Bioinformatics in tropical disease research: a practical and case-study approach. Bethesda: National Center for Biotechnology Information. Recuperado de https://www.ncbi.nlm.nih.gov/books/NBK6826/pdf/Bookshelf_NBK6826.pdf
NLM
Gruber A, Durham AM, Huynh C. This book is the result of a long process that began with a series of Latin American Bioinformatics Training Courses for Tropical Disease Research. [Prefácio] [Internet]. Bioinformatics in tropical disease research: a practical and case-study approach. 2008 ;[citado 2025 nov. 23 ] Available from: https://www.ncbi.nlm.nih.gov/books/NBK6826/pdf/Bookshelf_NBK6826.pdf
Vancouver
Gruber A, Durham AM, Huynh C. This book is the result of a long process that began with a series of Latin American Bioinformatics Training Courses for Tropical Disease Research. [Prefácio] [Internet]. Bioinformatics in tropical disease research: a practical and case-study approach. 2008 ;[citado 2025 nov. 23 ] Available from: https://www.ncbi.nlm.nih.gov/books/NBK6826/pdf/Bookshelf_NBK6826.pdf
Monografia/livro
Bioinformatics in tropical disease research: a practical and case-study approach (2008)
Gruber, Arthur ; Durham, Alan Mitchell ; Huynh, Chuong; Portillo, Hernando A del
Unidades: ICB, IME
Assuntos: BIOINFORMÁTICA, BANCO DE DADOS
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
GRUBER, Arthur et al. Bioinformatics in tropical disease research: a practical and case-study approach. . Bethesda: National Center for Biotechnology Information. Disponível em: https://www.ncbi.nlm.nih.gov/books/NBK6818/pdf/Bookshelf_NBK6818.pdf. Acesso em: 23 nov. 2025. , 2008
APA
Gruber, A., Durham, A. M., Huynh, C., & Portillo, H. A. del. (2008). Bioinformatics in tropical disease research: a practical and case-study approach. Bethesda: National Center for Biotechnology Information. Recuperado de https://www.ncbi.nlm.nih.gov/books/NBK6818/pdf/Bookshelf_NBK6818.pdf
NLM
Gruber A, Durham AM, Huynh C, Portillo HA del. Bioinformatics in tropical disease research: a practical and case-study approach [Internet]. 2008 ;[citado 2025 nov. 23 ] Available from: https://www.ncbi.nlm.nih.gov/books/NBK6818/pdf/Bookshelf_NBK6818.pdf
Vancouver
Gruber A, Durham AM, Huynh C, Portillo HA del. Bioinformatics in tropical disease research: a practical and case-study approach [Internet]. 2008 ;[citado 2025 nov. 23 ] Available from: https://www.ncbi.nlm.nih.gov/books/NBK6818/pdf/Bookshelf_NBK6818.pdf
Artigo de periodico
EGene: a configurable pipeline generation system for automated sequence analysis (2005)
Durham, Alan Mitchell ; Kashiwabara, André Yoshiaki; Matsunaga, Fernando Tadashi Guerrera; Ahagon, P. H.; Rainone, Flávia; Varuzza, Leonardo; Gruber, Arthur
Fonte: Bioinformatics. Unidades: IME, FMVZ
Assuntos: COMPUTAÇÃO APLICADA, BIOINFORMÁTICA
A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas
ABNT
DURHAM, Alan Mitchell et al. EGene: a configurable pipeline generation system for automated sequence analysis. Bioinformatics, v. 21, n. 12, p. 15 2812–2813, 2005Tradução . . Disponível em: https://doi.org/10.1093/bioinformatics/bti424. Acesso em: 23 nov. 2025.
APA
Durham, A. M., Kashiwabara, A. Y., Matsunaga, F. T. G., Ahagon, P. H., Rainone, F., Varuzza, L., & Gruber, A. (2005). EGene: a configurable pipeline generation system for automated sequence analysis. Bioinformatics, 21( 12), 15 2812–2813. doi:10.1093/bioinformatics/bti424
NLM
Durham AM, Kashiwabara AY, Matsunaga FTG, Ahagon PH, Rainone F, Varuzza L, Gruber A. EGene: a configurable pipeline generation system for automated sequence analysis [Internet]. Bioinformatics. 2005 ; 21( 12): 15 2812–2813.[citado 2025 nov. 23 ] Available from: https://doi.org/10.1093/bioinformatics/bti424
Vancouver
Durham AM, Kashiwabara AY, Matsunaga FTG, Ahagon PH, Rainone F, Varuzza L, Gruber A. EGene: a configurable pipeline generation system for automated sequence analysis [Internet]. Bioinformatics. 2005 ; 21( 12): 15 2812–2813.[citado 2025 nov. 23 ] Available from: https://doi.org/10.1093/bioinformatics/bti424

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