Exportar registro bibliográfico


Metrics:

QTL mapping for fruit quality in Citrus using DArTseq markers (2017)

  • Authors:
  • Autor USP: FIGUEIRA, ANTONIO VARGAS DE OLIVEIRA - CENA
  • Unidade: CENA
  • DOI: 10.1186/s12864-017-3629-2
  • Subjects: LARANJA; GENÉTICA VEGETAL
  • Language: Inglês
  • Imprenta:
  • Source:
    • Título do periódico: BMC Genomics
    • Volume/Número/Paginação/Ano: v. 18, article 289, 2017
  • DOI
    Informações sobre o DOI: 10.1186/s12864-017-3629-2 (Fonte: oaDOI API)
    • Este periódico é de acesso aberto
    • Este artigo é de acesso aberto
    • URL de acesso aberto
    • Cor do Acesso Aberto: gold
    • Licença: cc-by

    How to cite
    A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas

    • ABNT

      CURTOLO, Maiara; CRISTOFANI-YALY, Mariângela; GAZAFFI, Rodrigo; et al. QTL mapping for fruit quality in Citrus using DArTseq markers. BMC Genomics, London, v. 18, 2017. DOI: 10.1186/s12864-017-3629-2.
    • APA

      Curtolo, M., Cristofani-Yaly, M., Gazaffi, R., Takita, M. A., Figueira, A. V. de O., & Machado, M. A. (2017). QTL mapping for fruit quality in Citrus using DArTseq markers. BMC Genomics, 18. doi:10.1186/s12864-017-3629-2
    • NLM

      Curtolo M, Cristofani-Yaly M, Gazaffi R, Takita MA, Figueira AV de O, Machado MA. QTL mapping for fruit quality in Citrus using DArTseq markers. BMC Genomics. 2017 ; 18
    • Vancouver

      Curtolo M, Cristofani-Yaly M, Gazaffi R, Takita MA, Figueira AV de O, Machado MA. QTL mapping for fruit quality in Citrus using DArTseq markers. BMC Genomics. 2017 ; 18

    Referências citadas na obra
    USDA. United States Department of Agriculture. Citrus: World Markets and Trade; 2015.
    Frost HB, Soost RK. Seed reproduction, development of gametes and embryos. In: Reuther W, Batchelor LD, Webber HJ, editors. The citrus industry, vol. 2. 334: 292; 1968.
    Grosser JW, Gmitter Jr FG. Protoplast fusion and citrus improvement. Plant Breeding Reviews. 1990;8:339–74.
    Febres VJ, Lee RF, Moore GA. Genetic transformation of citrus for pathogen resistance. In: Khan IA, editor. Citrus genetics, breeding and biotechnology, vol. 1. Wallingford: CAB International; 2007. p. 307–27.
    Machado MA, Cristofani–Yaly M, Bastianel M. Breeding genetic and genomic of citrus for disease resistance. Rev Bras Frutic. 2011;3:158–72.
    Gmitter Jr FG, Xiao SY, Huang S, HU XL, Garnsey SM, Deng Z. A localized linkage map of the citrus tristeza virus resistance gene region. Theor Appl Genet. 1996;6:688–95.
    Oliveira RP, Cristofani M, Machado MA. Genetic linkage maps of ‘Pera’ sweet orange and ‘Cravo’ mandarin with RAPD markers. Pesq Agrop Brasileira. 2004;39:159–65.
    Gulsen O, Uzun A, Canan I, Seday U, Canihos E. A new citrus linkage map based on SRAP SSR ISSR POGP RGA and RAPD markers. Euphytica. 2010;173:265–77.
    García MR, Asins MJ, Carbonell EA. QTL analysis of yield and seed number in Citrus. Theor Appl Genet. 2000;101:487–93.
    Dalkilic Z, Timmer LW, Gmitter Jr FG. Linkage of an Alternaria disease resistance gene in mandarin hybrids with RAPD fragments. J Am Soc Hort Sci. 2005;130:191–5.
    Luro F, Bové JM, Ollitrault P.  DNA Amplified fingerprinting a useful tool for determination of genetic origin and diversity analysis in Citrus. HortScience 1995;30:1063–7.
    Oliveira AC, Bastianel M, Cristofani–Yaly M, Morais Do Amaral A, Machado MA. Development of genetic maps of the citrus varieties ‘Murcott’ tangor and ‘Pera’ sweet orange by using fluorescent AFLP markers. J Appl Genet. 2007;48:219–31.
    Kijas JMH, Thomas MR, Fowler JCA, Roose ML. Integration of trinucleotide microsatellites into a linkage map of Citrus. Theor Appl Genet. 1997;94:701.
    Ruiz C, Asins MJ. Comparison between Poncirus and Citrus genetic linkage maps. Theor Appl Genet. 2003;106:826–36.
    Chen L, Storey JD. Relaxed significance criteria for linkage analysis. Genetics. 2006;173:2371–81.
    Raga V, Bernet GP, Carbonell EA, Asins MJ. Segregation and linkage analyses in two complex populations derived from the citrus rootstock Cleopatra mandarin. Inheritance of seed reproductive traits. Tree Genet Genomes. 2012;8:1061–71.
    Ollitrault P, Terol J, Garcia–Lor A, Bérard A, Chauveau A, Froelicher Y, Belzile C, Morillon R, Navarro L, Brunel D, Talon M. SNP mining in C. clementina BAC end sequences; transferability in the Citrus genus (Rutaceae) phylogenetic inferences and perspectives for genetic mapping. BMC Genomics. 2012;13:13–6.
    Jaccoud D. Diversity arrays, a solid–state technology for sequence information independent genotyping. Nucleic Acids Res. 2001;29:25.
    Kilian A, Huttner E, Wenzl P, Jaccoud D, Carling J, Caig V, Evers M, Heller–Uszynska K, Cayla C, Patarapuwadol S, Xia L, Yang S, Thomson B. The fast and the cheap, SNP and DArT–based whole genome proWling for crop improvement. In: INTERNATIONAL CONGRESS IN THE WAKE OF THE DOUBLE HELIX, FROM THE GREEN REVOLUTION TO THE GENE REVOLUTION 2003. Bologna: Avenue Media; 2005. p. 443–61.
    Jones N, Ougham H, Thomas H, Pasakinskiene I. Markers and mapping revisited: finding your gene. New Phytol. 2009;137:165–77.
    Xu Q, Chen LL, Ruan X, Chen D, Zhu A, Chen C, Bertrand D, Jiao WB, Hao BH, Lyon MP, et al. The draft genome of sweet orange (Citrus sinensis). Nat Genet. 2012;45:59–66.
    Oliveira AC, Garcia AN, Cristofani M, Machado MA. Identification of citrus hybrids through the combination of leaf apex morphology and SSR markers. Euphytica. 2002;128:397–403.
    Machado MA, Coletta Filho HD, Targon MLPN, Pompeu JJ. Genetic relationship of Mediterranean mandarins (C. deliciosa Tenore) using RAPD markers. Euphytica. 2002;92:321–6.
    Wu R, Ma CX, Painter I, Zeng ZB. Simultaneous maximum likelihood estimation of linkage and linkage phases in outcrossing species. Theor Popul Biol. 2002;61:349–63.
    Margarido GRA, Souza AP, Garcia AAF. OneMap, software for genetic mapping in outcrossing species. Hereditas. 2007;144:78–9.
    Doerge RW. Constructing genetic maps by rapid chain delineation. Journal of Quantitative Trait Loci. 1996;2:121–32.
    Kosambi DD. The estimation of map distances from recombination values. Ann Eugenics. 1943;12:172–5.
    Di Giorgi F, Ide BY, Dib K, Marchi RJ, Triboni HR, Wagner RL. Contribuição ao estudo do comportamento de algumas variedades de citros e suas implicações agroindustriais. Laranja. 1990;11(2):567–612.
    R Core Team: R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL http://www.R-project.org/ .
    Gazaffi R, Margarido GRA, Pastina MM, Mollinari M, Garcia AAF. Garcia A model for quantitative trait loci mapping linkage phase and segregation pattern estimation for a full-sib progeny. Tree Genet Genomes. 2014;10:791–801.
    Zeng Z. Precision mapping of quantitative trait loci. Genetics. 1994;136:1457–68.
    Churchill GA, Doerge RW. Empirical threshold values for quantitative trait mapping. Genetics. 1994;138:963–71.
    Cai QGCL, Guy CL, Moore GA. Extension of the linkage map in Citrus using random amplified polymorphic DNA (RAPD) markers and RFLP mapping of cold-acclimation-responsive loci. Theor Appl Genet. 1994;89(5):606–14.
    Song XL, Sun XZ, Zhang TZ. Segregation distortion and its effect on genetic mapping in plants. Chin J Agric Biotechnol. 2006;3:163–9.
    Bastianel M, Cristofany-Yaly M, Oliveira CA, Freitas-Astúa J, Garcia AAF, Resende MDV, Rodrigues V, Machado MA. Quantitative trait loci analysis of citrus leprosis resistance in an interspecific backcross family of (Citrus reticulata Blanco × C. sinensis L. Osbeck) × C. sinensis L. Osb. Euphytica. 2009;169(1):101–11.
    Chen C, Bowman KD, Choi YA, Dang PA, Rao MN, et al. EST-SSR genetic maps for Citrus sinensis and Poncirus trifoliata. Tree Genet Genomes. 2008;4(1):1–10.
    Siviero A, Cristofani M, Furtado EL, Garcia AAF, Coelho ASG, Machado MA. Identification of QTLs associated with citrus resistance to Phytophthora gummosis. J Appl Genet. 2006;47(1):23–8.
    Jarrell DC, Roose ML, Traugh SN, Kupper RS. A genetic map of citrus based on the segregation of isozymes and RFLPs in an intergeneric cross. Theor Appl Genet. 1992;84:1–2.
    Durham RE, Liou PC, Gmitter Jr FG, Moore GA. Linkage of restriction fragment length polymorphisms and isozymes in Citrus. Theor Appl Genet. 1992;84:39–48.
    Deng Z, Xiao S, Huang S, Gmitter Jr FG. Development and characterization of SCAR markers linked to the citrus tristeza virus resistance gene from Poncirus trifoliata. Genome. 1997;40(5):697–704.
    Laborda PR, Gazaffi R, Garcia AAF, Souza AP. A molecular linkage map for Drosophila mediopunctata confirms synteny with Drosophila melanogaster and suggests a region that controls the variation in the number of abdominal spots. Insect Mol Biol. 2012;21(1):89–95.
    Oliveira EJ, Vieira MLC, Garcia AAF, Munhoz CF, Margarido GRA, Consoli L, Matta FP, Moraes MC, Zucchi MI, Fungaro MHP. An integrated molecular map of yellow passion fruit based on simultaneous maximum-likelihood estimation of linkage and linkage phases. J Am Soc Hortic Sci. 2008;133(1):35–41.
    Budahn H, Peterka H, Mousa MAA, Ding Y, Zhang S, Li J. Molecular mapping in oil radish (Raphanus sativus L.) and QTL analysis of resistance against beet cyst nematode (Heterodera schachtii). Theor Appl Genet. 2009;118:775–82.
    Siviero A, Cristofani M, Boava LP, Machado MA.  Mapeamento de QTLs associados à produção de frutos e sementes em híbridos de Citrus sunki vs. Poncirus trifoliata. Rev. Bras. Frutic. 2002;24:741–3.
    Souza LM, Gazaffi R, Mantello CC, Silva CC, Garcia D, Guen VL, Cardoso SEA, Garcia AAF, Souza AP: QTL mapping of growth-related traits in a full-sib family of rubber tree (Hevea brasiliensis) evaluated in a sub-tropical climate. PLoSONE 2013;8(4):e61238. 10.1371/journal.pone.0061238 .
    Thumma BR, Baltunis BS, Bell JC, Emebiri LC, Moran GF, Southerton SG. Quantitative trait locus (QTL) analysis of growth and vegetative propagation traits in Eucalyptus nitens full-sib families. Tree Genet Genomes. 2010;6:877–89.
    Brown GR, Bassoni DL, Gill GP, Fontana JR, Wheeler NC, Megraw RA, Davis MF, Sewell MM, Tuskan GA, Neale DB. Identification of quantitative trait loci influencing wood property traits in loblolly pine (Pinus taeda L.). III. QTL Verification and candidate gene mapping. Genetics. 2003;164:1537–46.
    Pot D, Rodrigues JC, Rozenberg P, Chantre G, Tibbits J, Cahalan C, Pichavant F, Plomion C. QTLs and candidate genes for wood properties in maritime pine (Pinus pinaster Ait.). Tree Genet Genomes. 2006;2:10–24.
    Pelgas B, Bousquet J, Meirmans PG, Ritland K, Isabel N. QTL mapping in white spruce, gene maps and genomic regions underlying adaptive traits across pedigrees years and environments. BMC Genomics. 2011;12:145–50.
    Gion JM, Carouché A, Deweer S, Bedon F, Pichavant F, Charpentier JP, Baillères H, Rozenberg P, Carocha V, Ognouabi N, Verhaegen D, Grima-Pettenati J, Vigneron P, Plomion C. Comprehensive genetic dissection of wood properties in a widely-grown tropical tree, Eucalyptus. BMC Genomics. 2011;12:301–10.
    Opazo MC, Figueroa CR, Henríquez J, Herrera R, Bruno C, Valenzuela PDT, Moya-León MA. Characterization of two divergent cDNAs encoding xyloglucanendotransglycosylase/hydrolase (XTH) expressed in Fragaria chiloensis fruit. Plant Sci. 2010;179:479–88.
    Ronceret A, Guilleminot J, Lincker F, Gadea-Vacas J, Delorme V, Bechtold N, Pelletier G, Delseny M, Chabouté ME, Devic M. Genetic analysis of two Arabidopsis DNA polymerase epsilon subunits during early embryogenesis. Plant J. 2005;44:223–36.

Digital Library of Intellectual Production of Universidade de São Paulo     2012 - 2020